Os03g0850300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Sterile alpha motif SAM domain containing protein.
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Os03g0850300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Sterile alpha motif SAM domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.76 | 0.406 | 8.11 | 0.204 | 1.3 | 1.53 | -0.906 | -2.32 | 0.0706 | 16.8 | 0.1699 | 734 | -- | -- |
| 75.18 | 0.404 | 8.1 | 0.12 | 1.03 | 1.55 | 0.406 | -- | 0.101 | 17.5 | 0.05658 | 868 | -- | -- |
| 72.86 | 0.398 | 8.12 | 0.187 | 1.28 | 1.82 | -- | -1.45 | 0.0699 | 17.6 | 0.0568 | 838 | -- | -- |
| 75.16 | 0.404 | 8.12 | 0.168 | 1.37 | 1.94 | -- | -- | 0.1 | 17.7 | 0.05792 | 842 | -- | -- |
| 80.53 | 0.418 | 8.1 | 0.226 | -- | 0.961 | -- | -0.283 | 0.066 | -- | 0.17 | 1317 | -- | -- |
| 84.33 | 0.431 | 8.12 | -0.0601 | 0.359 | -- | -0.00485 | -- | -0.018 | 12.5 | -- | -- | -- | -- |
| 84.33 | 0.43 | 8.12 | -0.0603 | 0.359 | -- | -- | -- | -0.0181 | 12.5 | -- | -- | -- | -- |
| 80.59 | 0.418 | 8.1 | 0.167 | -- | 0.975 | -- | -- | 0.0735 | -- | 0.17 | 1323 | -- | -- |
| 75.83 | 0.406 | 8.12 | -- | 1.42 | 1.97 | -- | -- | 0.07 | 17.6 | 0.1713 | 825 | -- | -- |
| 92.42 | 0.449 | 8.13 | -0.0728 | -- | -- | -- | -- | -0.0242 | -- | -- | -- | -- | -- |
| 84.43 | 0.43 | 8.12 | -- | 0.36 | -- | -- | -- | -0.0113 | 12.5 | -- | -- | -- | -- |
| 81.22 | 0.42 | 8.11 | -- | -- | 0.894 | -- | -- | 0.0493 | -- | 0.17 | 1315 | -- | -- |
| 92.56 | 0.449 | 8.13 | -- | -- | -- | -- | -- | -0.0161 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.19 | humidity | 80 | 14400 | > th | dose independent | rect. | 3 | 2 |
| 7 | 71.64 | humidity | 80 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 9 | 71.65 | humidity | 80 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 12 | 71.76 | temperature | 25 | 90 | < th | dose independent | rect. | 1 | 9 |
| 34 | 72.22 | humidity | 80 | 14400 | < th | dose dependent | rect. | 22 | 9 |
| 44 | 72.39 | humidity | 80 | 14400 | < th | dose independent | rect. | 23 | 7 |
| 59 | 72.56 | humidity | 80 | 14400 | < th | dose dependent | rect. | 22 | 2 |
| 73 | 72.75 | humidity | 80 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 89 | 73.02 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 2 |
| 91 | 73.02 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 100 | 73.17 | wind | 1 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 107 | 73.28 | radiation | 20 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 113 | 73.36 | wind | 9 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 116 | 73.39 | wind | 1 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 119 | 73.42 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 122 | 73.43 | wind | 9 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 125 | 73.51 | temperature | 25 | 90 | < th | dose independent | rect. | 1 | 6 |
| 127 | 73.52 | wind | 9 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 136 | 73.64 | radiation | 1 | 720 | < th | dose dependent | rect. | 4 | 21 |
| 167 | 74.11 | humidity | 60 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 206 | 74.49 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 1 |
| 210 | 74.52 | temperature | 20 | 30 | > th | dose dependent | rect. | 16 | 12 |
| 223 | 74.58 | temperature | 20 | 30 | > th | dose dependent | rect. | 16 | 14 |
| 225 | 74.59 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 9 |
| 229 | 74.63 | radiation | 1 | 720 | > th | dose independent | rect. | 9 | 10 |
| 240 | 74.68 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 10 |
| 241 | 74.69 | radiation | 30 | 14400 | < th | dose independent | rect. | 17 | 13 |
| 253 | 74.75 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 255 | 74.76 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 8 |
| 264 | 74.79 | radiation | 1 | 720 | < th | dose independent | rect. | 4 | 21 |
| 279 | 74.83 | wind | 9 | 14400 | > th | dose dependent | rect. | 10 | 5 |
| 283 | 74.86 | wind | 9 | 14400 | > th | dose dependent | rect. | 5 | 10 |
| 287 | 74.88 | wind | 1 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 292 | 74.90 | wind | 9 | 14400 | > th | dose independent | rect. | 5 | 10 |
| 300 | 74.93 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 302 | 74.95 | temperature | 25 | 720 | > th | dose independent | rect. | 16 | 1 |
| 307 | 74.96 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 309 | 74.97 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 311 | 74.98 | wind | 9 | 14400 | > th | dose independent | rect. | 9 | 6 |
| 313 | 74.98 | wind | 9 | 14400 | > th | dose dependent | rect. | 3 | 12 |
| 318 | 75.00 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 320 | 75.00 | temperature | 30 | 270 | < th | dose independent | rect. | 24 | 15 |
| 322 | 75.01 | wind | 9 | 14400 | > th | dose dependent | rect. | 23 | 16 |
| 324 | 75.02 | wind | 9 | 14400 | > th | dose independent | rect. | 3 | 12 |
| 335 | 75.05 | wind | 9 | 14400 | > th | dose independent | rect. | 23 | 16 |
| 336 | 75.05 | radiation | 30 | 10 | < th | dose dependent | rect. | 1 | 13 |
| 353 | 75.08 | radiation | 1 | 720 | < th | dose independent | rect. | 7 | 18 |
| 379 | 75.18 | radiation | 1 | 720 | < th | dose independent | rect. | 15 | 10 |
| 382 | 75.20 | humidity | 70 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 409 | 75.26 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 412 | 75.27 | temperature | 25 | 90 | > th | dose independent | rect. | 16 | 2 |
| 419 | 75.28 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 20 | 9 |
| 424 | 75.29 | wind | 9 | 14400 | < th | dose independent | rect. | 2 | 13 |
| 427 | 75.29 | temperature | 20 | 30 | > th | dose dependent | rect. | 16 | 8 |
| 428 | 75.30 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 19 |
| 441 | 75.32 | temperature | 20 | 270 | > th | dose independent | rect. | 4 | 21 |
| 446 | 75.33 | radiation | 10 | 10 | < th | dose independent | rect. | 1 | 22 |
| 447 | 75.33 | temperature | 10 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 452 | 75.34 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 2 |
| 470 | 75.40 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 1 | 3 |
| 475 | 75.41 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 9 |
| 480 | 75.42 | humidity | 70 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 488 | 75.45 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 5 |
| 491 | 75.46 | radiation | 10 | 10 | < th | dose independent | rect. | 1 | 14 |
| 496 | 75.47 | temperature | 10 | 90 | > th | dose dependent | rect. | 5 | 22 |
| 500 | 75.49 | humidity | 70 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 501 | 75.49 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 502 | 75.49 | radiation | 30 | 14400 | < th | dose independent | rect. | 17 | 7 |
| 511 | 75.51 | atmosphere | 1005 | 90 | > th | dose independent | rect. | 1 | 5 |
| 515 | 75.51 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 20 | 16 |
| 517 | 75.52 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 2 |
| 522 | 75.52 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 8 |
| 528 | 75.53 | radiation | 1 | 720 | < th | dose dependent | sin | 14 | NA |
| 530 | 75.53 | radiation | 1 | 720 | < th | dose dependent | rect. | 10 | 21 |
| 541 | 75.55 | wind | 9 | 14400 | < th | dose independent | rect. | 23 | 16 |
| 557 | 75.57 | radiation | 1 | 720 | < th | dose dependent | rect. | 4 | 14 |
| 562 | 75.58 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 566 | 75.58 | wind | 9 | 270 | < th | dose independent | rect. | 3 | 22 |
| 569 | 75.58 | radiation | 1 | 90 | < th | dose dependent | rect. | 10 | 15 |
| 583 | 75.60 | humidity | 80 | 720 | < th | dose independent | rect. | 10 | 22 |
| 584 | 75.60 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 5 |
| 586 | 75.60 | radiation | 20 | 90 | < th | dose dependent | rect. | 1 | 10 |
| 591 | 75.61 | humidity | 80 | 720 | > th | dose independent | rect. | 10 | 22 |
| 599 | 75.62 | humidity | 80 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 608 | 75.64 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 611 | 75.64 | radiation | 1 | 720 | > th | dose independent | rect. | 15 | 22 |
| 631 | 75.67 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 632 | 75.67 | radiation | 30 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 645 | 75.68 | radiation | 1 | 720 | > th | dose independent | rect. | 16 | 14 |
| 657 | 75.70 | humidity | 80 | 720 | > th | dose independent | rect. | 20 | 21 |
| 662 | 75.71 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 673 | 75.72 | radiation | 1 | 720 | < th | dose dependent | rect. | 15 | 10 |
| 679 | 75.73 | atmosphere | 1010 | 10 | < th | dose independent | rect. | 16 | 14 |
| 693 | 75.74 | radiation | 1 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 699 | 75.75 | radiation | 20 | 10 | < th | dose independent | rect. | 9 | 21 |
| 700 | 75.75 | radiation | 1 | 720 | < th | dose dependent | no | NA | NA |
| 709 | 75.76 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 711 | 75.77 | radiation | 1 | 720 | > th | dose independent | sin | 21 | NA |
| 726 | 75.78 | radiation | 30 | 10 | < th | dose dependent | rect. | 1 | 22 |
| 731 | 75.79 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 760 | 75.83 | wind | 1 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 791 | 75.86 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 2 | 10 |
| 795 | 75.86 | humidity | 60 | 14400 | < th | dose independent | rect. | 16 | 18 |
| 802 | 75.87 | humidity | 80 | 720 | < th | dose independent | rect. | 15 | 22 |
| 810 | 75.88 | radiation | 10 | 14400 | < th | dose dependent | rect. | 24 | 2 |
| 816 | 75.89 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 830 | 75.90 | radiation | 1 | 90 | < th | dose independent | rect. | 10 | 15 |
| 859 | 75.93 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 873 | 75.93 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 875 | 75.93 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 16 |
| 879 | 75.94 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 21 | 8 |
| 882 | 75.94 | radiation | 10 | 10 | < th | dose independent | rect. | 1 | 18 |
| 888 | 75.95 | radiation | 1 | 720 | > th | dose independent | rect. | 16 | 3 |
| 911 | 75.96 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 4 |
| 924 | 75.96 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 21 |
| 926 | 75.97 | radiation | 1 | 720 | < th | dose independent | sin | 15 | NA |
| 935 | 75.97 | humidity | 60 | 14400 | < th | dose dependent | sin | 14 | NA |
| 940 | 75.97 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 19 |
| 962 | 75.99 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 965 | 75.99 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 22 |
| 978 | 76.01 | humidity | 60 | 14400 | < th | dose independent | sin | 11 | NA |
| 984 | 76.01 | wind | 5 | 270 | < th | dose independent | rect. | 5 | 9 |
| 986 | 76.01 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 14 |