Os03g0850000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glucose/ribitol dehydrogenase family protein.
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Os03g0850000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glucose/ribitol dehydrogenase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.05 | 0.182 | 11.9 | 0.397 | 0.935 | 0.128 | -0.232 | -0.642 | 0.139 | 21.7 | 70.1 | 93 | -- | -- |
| 16.2 | 0.187 | 11.9 | 0.369 | 0.937 | 0.139 | -0.49 | -- | 0.13 | 21.6 | 73.01 | 87 | -- | -- |
| 15.22 | 0.182 | 11.9 | 0.408 | 0.933 | 0.13 | -- | -0.716 | 0.14 | 21.7 | 70.73 | 82 | -- | -- |
| 16.97 | 0.193 | 11.9 | 0.383 | 0.925 | 0.146 | -- | -- | 0.133 | 21.6 | 73 | 89 | -- | -- |
| 60.5 | 0.364 | 11.9 | 0.418 | -- | 0.376 | -- | -0.765 | 0.114 | -- | 70.73 | 82 | -- | -- |
| 17.03 | 0.193 | 11.9 | 0.347 | 0.974 | -- | -0.509 | -- | 0.129 | 22.1 | -- | -- | -- | -- |
| 18.05 | 0.199 | 11.9 | 0.367 | 0.976 | -- | -- | -- | 0.131 | 22.1 | -- | -- | -- | -- |
| 62.3 | 0.369 | 11.9 | 0.42 | -- | 0.351 | -- | -- | 0.135 | -- | 76 | 12 | -- | -- |
| 20.78 | 0.213 | 11.9 | -- | 0.932 | 0.127 | -- | -- | 0.0899 | 21.7 | 72.99 | 100 | -- | -- |
| 75.61 | 0.406 | 11.9 | 0.38 | -- | -- | -- | -- | 0.132 | -- | -- | -- | -- | -- |
| 21.6 | 0.217 | 11.9 | -- | 0.978 | -- | -- | -- | 0.0897 | 22.1 | -- | -- | -- | -- |
| 66.9 | 0.382 | 11.9 | -- | -- | 0.343 | -- | -- | 0.0961 | -- | 74.15 | 13 | -- | -- |
| 79.41 | 0.416 | 11.9 | -- | -- | -- | -- | -- | 0.0895 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.15 | radiation | 20 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 12 | 14.83 | humidity | 70 | 90 | > th | dose independent | rect. | 5 | 23 |
| 17 | 14.94 | humidity | 70 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 19 | 14.96 | humidity | 70 | 90 | > th | dose independent | rect. | 21 | 23 |
| 21 | 14.97 | humidity | 70 | 90 | < th | dose independent | rect. | 11 | 22 |
| 31 | 15.00 | humidity | 90 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 35 | 15.02 | humidity | 70 | 90 | > th | dose independent | rect. | 13 | 23 |
| 36 | 15.02 | humidity | 70 | 90 | > th | dose independent | rect. | 15 | 23 |
| 37 | 15.02 | radiation | 20 | 90 | < th | dose independent | rect. | 5 | 23 |
| 38 | 15.02 | humidity | 90 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 42 | 15.03 | humidity | 70 | 90 | < th | dose independent | rect. | 6 | 12 |
| 68 | 15.03 | radiation | 30 | 10 | < th | dose dependent | rect. | 6 | 8 |
| 87 | 15.06 | humidity | 70 | 90 | > th | dose independent | no | NA | NA |
| 90 | 15.06 | radiation | 1 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 91 | 15.07 | humidity | 70 | 90 | > th | dose independent | rect. | 1 | 23 |
| 96 | 15.07 | humidity | 70 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 133 | 15.09 | radiation | 10 | 90 | > th | dose independent | rect. | 9 | 23 |
| 134 | 15.09 | radiation | 40 | 90 | < th | dose independent | rect. | 15 | 23 |
| 140 | 15.09 | radiation | 40 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 141 | 15.09 | radiation | 40 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 142 | 15.10 | humidity | 70 | 90 | < th | dose independent | no | NA | NA |
| 190 | 15.10 | humidity | 70 | 30 | > th | dose independent | rect. | 11 | 23 |
| 217 | 15.11 | radiation | 1 | 90 | > th | dose dependent | sin | 19 | NA |
| 255 | 15.12 | humidity | 70 | 30 | > th | dose independent | rect. | 17 | 23 |
| 256 | 15.12 | humidity | 70 | 90 | < th | dose independent | rect. | 17 | 23 |
| 274 | 15.13 | radiation | 40 | 270 | > th | dose dependent | sin | 21 | NA |
| 276 | 15.13 | radiation | 40 | 270 | > th | dose dependent | rect. | 9 | 5 |
| 279 | 15.13 | humidity | 60 | 10 | > th | dose dependent | rect. | 6 | 8 |
| 306 | 15.14 | humidity | 80 | 270 | > th | dose independent | sin | 3 | NA |
| 307 | 15.14 | humidity | 70 | 90 | < th | dose independent | sin | 22 | NA |
| 311 | 15.14 | humidity | 70 | 90 | > th | dose independent | rect. | 9 | 23 |
| 318 | 15.14 | radiation | 40 | 270 | > th | dose dependent | no | NA | NA |
| 587 | 15.15 | radiation | 40 | 90 | < th | dose dependent | no | NA | NA |
| 602 | 15.16 | humidity | 90 | 90 | < th | dose dependent | sin | 23 | NA |
| 619 | 15.17 | humidity | 70 | 30 | > th | dose independent | rect. | 6 | 14 |
| 636 | 15.18 | radiation | 40 | 270 | > th | dose independent | sin | 23 | NA |
| 639 | 15.18 | radiation | 40 | 270 | > th | dose independent | rect. | 9 | 5 |
| 714 | 15.18 | radiation | 1 | 90 | > th | dose dependent | rect. | 9 | 23 |
| 723 | 15.19 | radiation | 40 | 270 | > th | dose independent | no | NA | NA |
| 918 | 15.19 | humidity | 50 | 90 | > th | dose dependent | rect. | 5 | 23 |
| 999 | 15.20 | radiation | 40 | 270 | < th | dose independent | rect. | 13 | 23 |