Os03g0838900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0838900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.5 | 0.392 | 12.5 | -1.23 | 2.37 | -1.21 | 1.58 | -0.429 | -0.794 | 8.2 | 53.11 | 900 | -- | -- |
| 69.68 | 0.389 | 12.5 | -1.24 | 2.37 | -1.23 | 1.41 | -- | -0.793 | 8.21 | 54.66 | 910 | -- | -- |
| 75.13 | 0.404 | 12.6 | -1.28 | 2.37 | -1.22 | -- | 0.732 | -0.814 | 8.19 | 54.88 | 901 | -- | -- |
| 75.68 | 0.405 | 12.6 | -1.2 | 2.37 | -1.18 | -- | -- | -0.837 | 8.18 | 61.44 | 911 | -- | -- |
| 285.66 | 0.787 | 12.7 | -1.38 | -- | -0.866 | -- | 0.538 | -0.898 | -- | 67.89 | 1410 | -- | -- |
| 91.98 | 0.45 | 12.6 | -1.2 | 1.95 | -- | 1.21 | -- | -0.767 | 7.82 | -- | -- | -- | -- |
| 96.2 | 0.459 | 12.6 | -1.17 | 1.96 | -- | -- | -- | -0.769 | 7.78 | -- | -- | -- | -- |
| 238 | 0.719 | 12.6 | -1.24 | -- | 1.41 | -- | -- | -0.72 | -- | 67 | 575 | -- | -- |
| 111.79 | 0.492 | 12.5 | -- | 2.33 | -1.17 | -- | -- | -0.726 | 8.33 | 73.86 | 925 | -- | -- |
| 303.24 | 0.814 | 12.6 | -1.15 | -- | -- | -- | -- | -0.741 | -- | -- | -- | -- | -- |
| 132.32 | 0.538 | 12.5 | -- | 1.95 | -- | -- | -- | -0.638 | 7.82 | -- | -- | -- | -- |
| 272.64 | 0.769 | 12.6 | -- | -- | 1.45 | -- | -- | -0.529 | -- | 65 | 584 | -- | -- |
| 337.94 | 0.858 | 12.6 | -- | -- | -- | -- | -- | -0.614 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.57 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 3 | 65.05 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 4 | 65.05 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 5 | 65.08 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 7 | 65.26 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 9 | 65.62 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 11 | 65.96 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 31 | 66.87 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 10 |
| 59 | 67.77 | humidity | 80.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 81 | 68.11 | humidity | 80.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 223 | 70.77 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 1 | NA |
| 246 | 71.04 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 249 | 71.07 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 7 | 19 |
| 250 | 71.08 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 282 | 71.29 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 7 | 23 |
| 298 | 71.39 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 302 | 71.40 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 18 | 23 |
| 306 | 71.42 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 5 | 21 |
| 333 | 71.56 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 9 | 17 |
| 369 | 71.70 | humidity | 60.0 | 720 | > th | dose dependent | no | NA | NA |
| 376 | 71.71 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 9 | 23 |
| 387 | 71.76 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 424 | 71.90 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 23 | 17 |
| 437 | 71.93 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 576 | 72.27 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 589 | 72.30 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 10 | 4 |
| 640 | 72.41 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 9 | 6 |
| 662 | 72.47 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 7 | 17 |
| 725 | 72.66 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 10 | 21 |
| 759 | 72.75 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 12 | 5 |
| 832 | 72.87 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 842 | 72.89 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 13 | 22 |
| 852 | 72.92 | humidity | 60.0 | 720 | > th | dose dependent | sin | 19 | NA |
| 862 | 72.94 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 3 | NA |
| 912 | 73.03 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 943 | 73.10 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 9 | 8 |
| 955 | 73.11 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 17 | 23 |