Os03g0832600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Galactokinase (EC 2.7.1.6) (Galactose kinase).
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Os03g0832600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Galactokinase (EC 2.7.1.6) (Galactose kinase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.29 | 0.34 | 9.94 | 0.244 | 0.693 | 0.284 | -0.504 | 3.76 | 0.389 | 22.7 | 0.1427 | 4745 | -- | -- |
| 57.83 | 0.354 | 9.97 | 0.315 | 0.698 | 0.711 | -0.582 | -- | 0.425 | 22.8 | 1 | 3842 | -- | -- |
| 53.27 | 0.34 | 9.93 | 0.266 | 0.697 | 0.269 | -- | 3.78 | 0.391 | 22.5 | 0.1275 | 4742 | -- | -- |
| 58.58 | 0.356 | 9.97 | 0.328 | 0.724 | 0.668 | -- | -- | 0.437 | 22.6 | 0.6058 | 7000 | -- | -- |
| 83.15 | 0.425 | 9.91 | 0.27 | -- | 0.248 | -- | 3.96 | 0.391 | -- | 0.1495 | 4807 | -- | -- |
| 66.44 | 0.382 | 9.98 | 0.513 | 0.705 | -- | -0.466 | -- | 0.368 | 22.8 | -- | -- | -- | -- |
| 67.3 | 0.384 | 9.98 | 0.533 | 0.71 | -- | -- | -- | 0.37 | 22.6 | -- | -- | -- | -- |
| 87.86 | 0.437 | 9.95 | 0.245 | -- | 0.705 | -- | -- | 0.433 | -- | 0.8938 | 18916 | -- | -- |
| 57.18 | 0.352 | 9.97 | -- | 0.696 | 0.765 | -- | -- | 0.446 | 22.7 | 0.6549 | 21919 | -- | -- |
| 98.33 | 0.463 | 9.96 | 0.547 | -- | -- | -- | -- | 0.374 | -- | -- | -- | -- | -- |
| 74.8 | 0.405 | 10 | -- | 0.714 | -- | -- | -- | 0.311 | 22.7 | -- | -- | -- | -- |
| 87.81 | 0.436 | 9.95 | -- | -- | 0.775 | -- | -- | 0.436 | -- | 1.277 | 22154 | -- | -- |
| 106.21 | 0.481 | 9.98 | -- | -- | -- | -- | -- | 0.313 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.25 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 12 | 48.87 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 28 | 49.32 | humidity | 80.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 43 | 49.54 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 10 |
| 46 | 49.63 | humidity | 80.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 105 | 50.61 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 111 | 50.64 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 126 | 50.86 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 132 | 50.95 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 9 |
| 142 | 51.08 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 11 | 6 |
| 143 | 51.08 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 6 | 11 |
| 147 | 51.11 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 169 | 51.35 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 172 | 51.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 173 | 51.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 3 |
| 176 | 51.40 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 190 | 51.53 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 8 | 7 |
| 198 | 51.60 | radiation | 1.0 | 720 | < th | dose independent | rect. | 6 | 18 |
| 207 | 51.67 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 214 | 51.73 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 9 |
| 239 | 51.91 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 9 |
| 241 | 51.91 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 9 |
| 258 | 51.99 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 279 | 52.07 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 6 | 11 |
| 282 | 52.07 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 6 | 11 |
| 297 | 52.15 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 299 | 52.16 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 22 |
| 308 | 52.23 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 312 | 52.24 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 22 | 19 |
| 315 | 52.25 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 6 | 8 |
| 317 | 52.26 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 13 |
| 318 | 52.26 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 1 | NA |
| 320 | 52.26 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 13 |
| 337 | 52.33 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 13 |
| 365 | 52.41 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 377 | 52.46 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 7 | 17 |
| 389 | 52.50 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 3 | 16 |
| 436 | 52.62 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 522 | 52.78 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 2 | NA |
| 524 | 52.78 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 2 | NA |
| 530 | 52.79 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 11 | 13 |
| 547 | 52.82 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 2 | NA |
| 556 | 52.84 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 6 | 11 |
| 561 | 52.84 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 13 | 11 |
| 563 | 52.85 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 564 | 52.85 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 575 | 52.86 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 586 | 52.88 | radiation | 1.0 | 720 | < th | dose independent | rect. | 11 | 13 |
| 588 | 52.88 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 2 | NA |
| 592 | 52.88 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 6 | 18 |
| 597 | 52.89 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 18 | 23 |
| 598 | 52.89 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 18 | 23 |
| 602 | 52.89 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 18 | 23 |
| 603 | 52.90 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 8 |
| 604 | 52.90 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 606 | 52.90 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 8 |
| 624 | 52.93 | radiation | 1.0 | 720 | < th | dose independent | rect. | 13 | 11 |
| 627 | 52.93 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 14 |
| 633 | 52.94 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 638 | 52.95 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 641 | 52.95 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 11 |
| 646 | 52.96 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 6 | 11 |
| 649 | 52.96 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 12 |
| 716 | 53.05 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 20 |
| 718 | 53.05 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 22 | 22 |
| 724 | 53.05 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 20 |
| 730 | 53.06 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 22 | 22 |
| 741 | 53.06 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 22 | 22 |
| 749 | 53.08 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 20 |
| 863 | 53.18 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 19 | 22 |
| 871 | 53.20 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 7 |
| 916 | 53.24 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 22 | NA |
| 931 | 53.25 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 3 | NA |
| 937 | 53.25 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 22 | 19 |
| 948 | 53.26 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 24 | 17 |
| 958 | 53.28 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 22 | NA |
| 959 | 53.28 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 22 | NA |
| 961 | 53.28 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 6 | 16 |
| 982 | 53.30 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 985 | 53.30 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |