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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0830900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lipase, class 3 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.97 (0.0577) R2 : 0.344
β1 : -3.17 (0.261) R2dD : 0.396 R2D : -0.028
β2 : 1.63 (0.165) R2dC : 0.234 R2C : -0.124
β3 : 3.03 (0.263) R2dE : 0.346 R2E : -0.167
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -5.51 (1.01) R2dD*E : 0.0803 R2D*E : -0.121
γ1 : -0.559 (0.127) R2dN8 : 0.0475 R2N8 : -0.0844
σ : 0.985
deviance : 447.46
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_____
C
peak time of C : 21.5
E
wheather : temperature
threshold : 9.055
memory length : 731
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 16.8
open length of G : 18

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
447.44 0.994 4.96 -3.19 1.58 2.93 -0.287 -5.77 -0.555 21.7 9.533 728 16.9 18
468.42 1.01 4.91 -2.19 1.98 3.18 1.35 -- -0.415 21.9 10.7 729 18.1 16.8
447.46 0.985 4.97 -3.17 1.63 3.03 -- -5.51 -0.559 21.5 9.055 731 16.8 18
474.04 1.01 4.88 -2.25 2.08 3.29 -- -- -0.358 22 9.752 737 18.2 16.9
480.73 1.02 4.88 -2.64 -- 2.39 -- -1.94 -0.429 -- -8.934 1566 17.2 17.1
560.69 1.11 4.72 -1.64 0.874 -- -0.926 -- 0.102 2.34 -- -- -- --
562.85 1.11 4.72 -1.61 0.871 -- -- -- 0.11 1.75 -- -- -- --
486.71 1.03 4.81 -2.21 -- 2.41 -- -- -0.353 -- -47.38 1499 17.5 17.6
591.94 1.13 4.77 -- 2.22 2.9 -- -- 0.039 21.8 2.38 756 17.8 16.9
608.94 1.15 4.71 -1.57 -- -- -- -- 0.129 -- -- -- -- --
631.2 1.18 4.68 -- 0.842 -- -- -- 0.289 1.7 -- -- -- --
601.28 1.14 4.77 -- -- 1.61 -- -- -0.00146 -- -9.912 1735 15.8 15.3
674.36 1.21 4.67 -- -- -- -- -- 0.304 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 437.25 humidity 90 14400 > th dose dependent rect. 22 1
2 437.70 humidity 90 14400 > th dose dependent rect. 21 3
12 444.15 humidity 90 14400 > th dose dependent rect. 6 1
23 447.23 humidity 90 14400 > th dose dependent sin 15 NA
29 447.55 humidity 90 14400 > th dose dependent rect. 4 22
33 447.87 humidity 90 14400 > th dose dependent rect. 5 3
34 447.87 temperature 10 720 > th dose dependent rect. 17 18
48 448.76 humidity 90 14400 > th dose dependent rect. 15 20
56 448.98 humidity 90 14400 > th dose dependent rect. 5 5
66 449.07 humidity 90 14400 > th dose dependent rect. 18 22
93 449.39 humidity 90 14400 > th dose dependent rect. 9 23
94 449.43 humidity 90 14400 > th dose dependent no NA NA
125 449.99 humidity 90 14400 < th dose independent rect. 21 2
194 451.77 radiation 1 14400 > th dose independent rect. 18 12
226 452.75 humidity 90 14400 > th dose independent rect. 22 1
245 453.47 temperature 30 720 < th dose dependent rect. 20 15
255 453.67 temperature 30 720 < th dose dependent rect. 20 17
301 455.00 humidity 90 14400 < th dose independent rect. 18 5
304 455.06 humidity 90 14400 > th dose dependent sin 3 NA
389 456.68 humidity 90 14400 > th dose independent rect. 18 6
453 457.59 radiation 1 14400 > th dose independent rect. 4 2
472 457.87 radiation 1 14400 < th dose independent rect. 23 7
478 457.99 radiation 1 14400 < th dose independent rect. 19 11
485 458.07 radiation 1 14400 < th dose independent rect. 3 3
557 458.89 temperature 30 720 < th dose dependent sin 8 NA
571 459.11 temperature 10 720 > th dose dependent sin 10 NA
593 459.51 humidity 90 14400 > th dose independent rect. 18 19
605 459.61 humidity 80 14400 < th dose independent rect. 18 1
606 459.61 humidity 90 14400 > th dose independent rect. 18 17
655 460.28 humidity 90 14400 < th dose independent rect. 6 20
695 460.63 humidity 90 14400 < th dose independent rect. 17 18
697 460.67 humidity 90 14400 > th dose independent rect. 6 21
721 460.89 humidity 90 14400 < th dose independent rect. 9 16
756 461.11 humidity 90 14400 < th dose independent sin 16 NA
805 461.43 humidity 90 14400 > th dose independent sin 15 NA
818 461.48 humidity 90 14400 > th dose independent rect. 1 23
821 461.49 humidity 90 14400 > th dose independent rect. 9 18
873 461.82 humidity 90 14400 > th dose independent no NA NA
875 461.83 humidity 90 14400 > th dose independent rect. 9 23
992 462.47 humidity 90 14400 > th dose independent rect. 12 15