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Os03g0827500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : SPX, N-terminal domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.67 (0.0193) R2 : 0.0283
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.148 (0.0406) R2dN8 : 0.0365 R2N8 : 0.0283
σ : 0.363
deviance : 60.58
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
34.58 0.276 9.68 0.253 0.505 0.453 0.329 0.412 0.218 22.1 70.07 1471 -- --
34.94 0.275 9.67 0.306 0.502 0.473 0.308 -- 0.23 22.1 71 1470 -- --
35 0.276 9.68 0.237 0.504 0.45 -- 0.443 0.211 22.2 70.01 1475 -- --
35.4 0.277 9.67 0.301 0.498 0.474 -- -- 0.235 22.2 70.96 1475 -- --
49.98 0.329 9.66 0.214 -- 0.473 -- 0.396 0.206 -- 71.12 1527 -- --
43.28 0.308 9.68 0.211 0.514 -- 0.282 -- 0.171 22.1 -- -- -- --
43.59 0.309 9.68 0.2 0.511 -- -- -- 0.17 22.2 -- -- -- --
50.14 0.33 9.65 0.301 -- 0.52 -- -- 0.246 -- 71 1536 -- --
37.77 0.286 9.67 -- 0.502 0.448 -- -- 0.225 22 71 1479 -- --
59.45 0.36 9.67 0.207 -- -- -- -- 0.171 -- -- -- -- --
44.64 0.313 9.69 -- 0.512 -- -- -- 0.148 22.2 -- -- -- --
52.47 0.337 9.66 -- -- 0.504 -- -- 0.21 -- 72 1543 -- --
60.58 0.363 9.67 -- -- -- -- -- 0.148 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 33.18 humidity 70.0 14400 < th dose independent rect. 17 3
13 33.26 humidity 70.0 14400 < th dose dependent rect. 17 3
16 33.30 humidity 70.0 1440 > th dose independent rect. 17 19
30 33.41 humidity 70.0 14400 > th dose independent rect. 17 3
50 33.60 humidity 70.0 1440 < th dose independent rect. 17 19
51 33.62 radiation 20.0 1440 < th dose independent rect. 15 20
53 33.63 temperature 30.0 720 > th dose dependent rect. 18 15
56 33.65 humidity 70.0 14400 > th dose independent rect. 18 1
70 33.66 radiation 40.0 1440 < th dose dependent rect. 16 19
75 33.71 precipitation 0.1 43200 < th dose independent rect. 16 2
76 33.71 precipitation 0.1 43200 < th dose dependent rect. 16 2
79 33.74 precipitation 0.1 43200 > th dose independent rect. 16 2
89 33.76 temperature 25.0 720 > th dose dependent rect. 18 5
90 33.76 radiation 1.0 1440 > th dose dependent rect. 16 19
107 33.79 humidity 60.0 1440 > th dose dependent rect. 10 2
126 33.84 radiation 20.0 1440 > th dose independent rect. 15 20
131 33.85 humidity 70.0 1440 > th dose independent sin 10 NA
134 33.87 temperature 30.0 720 > th dose dependent rect. 18 1
161 33.96 radiation 10.0 1440 > th dose dependent rect. 9 2
163 33.96 radiation 40.0 90 < th dose dependent rect. 5 22
166 33.98 radiation 40.0 1440 < th dose dependent rect. 9 2
172 33.99 humidity 80.0 1440 < th dose dependent rect. 17 19
174 34.00 wind 1.0 43200 < th dose dependent rect. 5 1
180 34.01 radiation 20.0 1440 > th dose independent rect. 9 2
192 34.04 precipitation 0.1 43200 > th dose dependent rect. 16 4
205 34.05 humidity 70.0 1440 < th dose independent sin 10 NA
206 34.05 wind 7.0 43200 < th dose dependent rect. 5 1
220 34.09 humidity 70.0 14400 < th dose dependent sin 12 NA
254 34.16 humidity 70.0 14400 < th dose independent sin 12 NA
255 34.16 radiation 20.0 1440 < th dose independent rect. 9 1
270 34.17 radiation 40.0 90 < th dose independent rect. 5 10
289 34.19 humidity 70.0 720 > th dose independent rect. 18 14
306 34.22 radiation 10.0 1440 > th dose dependent rect. 6 5
307 34.22 radiation 40.0 1440 < th dose dependent rect. 6 5
322 34.23 wind 7.0 43200 < th dose dependent rect. 4 3
327 34.24 humidity 70.0 720 > th dose independent rect. 18 6
342 34.27 wind 3.0 43200 > th dose independent rect. 5 1
358 34.28 radiation 1.0 1440 > th dose dependent sin 11 NA
359 34.28 wind 1.0 43200 > th dose dependent rect. 5 1
369 34.29 radiation 40.0 1440 < th dose dependent sin 11 NA
372 34.29 radiation 40.0 1440 < th dose dependent rect. 24 11
376 34.30 radiation 20.0 1440 < th dose independent rect. 6 5
382 34.30 radiation 40.0 90 < th dose dependent rect. 5 10
391 34.32 radiation 20.0 1440 > th dose independent rect. 7 4
395 34.33 radiation 20.0 1440 < th dose independent sin 12 NA
396 34.33 wind 3.0 43200 < th dose independent rect. 5 1
406 34.33 radiation 20.0 1440 < th dose independent rect. 24 11
434 34.34 humidity 50.0 14400 > th dose independent rect. 16 19
441 34.35 wind 9.0 43200 < th dose independent rect. 12 1
462 34.39 humidity 70.0 1440 > th dose independent rect. 9 11
472 34.39 humidity 70.0 1440 > th dose independent rect. 9 22
485 34.40 wind 1.0 43200 > th dose dependent rect. 4 3
486 34.40 radiation 1.0 1440 > th dose dependent rect. 16 16
494 34.41 humidity 90.0 1440 < th dose dependent rect. 9 3
531 34.44 humidity 90.0 720 < th dose dependent rect. 17 4
533 34.44 wind 5.0 43200 < th dose dependent rect. 1 7
603 34.50 humidity 70.0 14400 > th dose independent sin 11 NA
608 34.50 humidity 90.0 1440 < th dose dependent rect. 10 1
615 34.50 humidity 90.0 1440 < th dose dependent rect. 7 5
629 34.51 humidity 70.0 1440 < th dose independent rect. 9 11
655 34.51 radiation 1.0 1440 > th dose dependent rect. 17 14
713 34.56 radiation 40.0 90 < th dose independent rect. 5 20
715 34.56 wind 7.0 43200 > th dose dependent rect. 12 1
723 34.56 wind 1.0 43200 < th dose dependent rect. 1 12
745 34.58 humidity 60.0 14400 > th dose independent sin 14 NA
748 34.58 humidity 50.0 14400 > th dose independent rect. 15 6
749 34.58 humidity 50.0 14400 > th dose independent rect. 15 9
779 34.60 humidity 50.0 1440 < th dose independent rect. 16 1
787 34.60 wind 1.0 43200 > th dose dependent rect. 1 7
791 34.60 humidity 60.0 90 > th dose dependent rect. 5 21
873 34.64 humidity 50.0 1440 < th dose dependent rect. 16 1
880 34.65 radiation 20.0 1440 > th dose independent sin 11 NA
882 34.65 humidity 70.0 1440 > th dose independent rect. 9 3
883 34.65 humidity 70.0 1440 > th dose independent rect. 6 14
909 34.66 humidity 70.0 1440 > th dose independent no NA NA
910 34.66 humidity 60.0 14400 > th dose independent rect. 12 8
937 34.66 humidity 70.0 1440 > th dose independent rect. 24 20
967 34.67 humidity 50.0 14400 > th dose independent rect. 17 17
994 34.67 humidity 50.0 720 > th dose dependent rect. 18 6