Os03g0824000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0824000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.38 | 0.263 | 9.13 | 0.0306 | 0.396 | -1.07 | -0.234 | 1.09 | 0.229 | 1.16 | 20.17 | 445 | -- | -- |
| 32.39 | 0.265 | 9.16 | -0.175 | 0.448 | -0.986 | -0.205 | -- | 0.171 | 1.16 | 20.2 | 502 | -- | -- |
| 31.61 | 0.262 | 9.13 | 0.0527 | 0.395 | -1.07 | -- | 1.16 | 0.234 | 1.13 | 20.22 | 444 | -- | -- |
| 32.48 | 0.265 | 9.15 | -0.173 | 0.461 | -1.04 | -- | -- | 0.172 | 1.33 | 18.34 | 517 | -- | -- |
| 35.88 | 0.279 | 9.11 | 0.123 | -- | -1.27 | -- | 1.38 | 0.288 | -- | 20.07 | 216 | -- | -- |
| 49.9 | 0.331 | 9.19 | -0.425 | 0.623 | -- | -0.237 | -- | -0.0124 | 3.59 | -- | -- | -- | -- |
| 50.07 | 0.331 | 9.18 | -0.421 | 0.622 | -- | -- | -- | -0.0111 | 3.6 | -- | -- | -- | -- |
| 36.71 | 0.282 | 9.14 | -0.106 | -- | -1.3 | -- | -- | 0.207 | -- | 17.9 | 202 | -- | -- |
| 32.99 | 0.268 | 9.15 | -- | 0.412 | -1.13 | -- | -- | 0.198 | 1.17 | 17.9 | 463 | -- | -- |
| 71.58 | 0.395 | 9.19 | -0.395 | -- | -- | -- | -- | 0.00547 | -- | -- | -- | -- | -- |
| 54.75 | 0.346 | 9.17 | -- | 0.613 | -- | -- | -- | 0.0358 | 3.6 | -- | -- | -- | -- |
| 36.98 | 0.283 | 9.14 | -- | -- | -1.35 | -- | -- | 0.222 | -- | 17.63 | 202 | -- | -- |
| 75.69 | 0.406 | 9.18 | -- | -- | -- | -- | -- | 0.0493 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.42 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 15 |
| 4 | 30.63 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 5 | 30.73 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 22 |
| 8 | 30.88 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 22 |
| 131 | 32.41 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 134 | 32.45 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 3 |
| 137 | 32.46 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 16 |
| 144 | 32.48 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 162 | 32.52 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 8 |
| 169 | 32.53 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 189 | 32.55 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 205 | 32.59 | temperature | 20 | 1440 | > th | dose dependent | sin | 2 | NA |
| 216 | 32.60 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 224 | 32.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 21 |
| 226 | 32.61 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 3 |
| 442 | 32.88 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 4 |
| 787 | 33.22 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 953 | 33.37 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 14 |