Os03g0822800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Chaperone protein dnaJ 1.
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Os03g0822800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Chaperone protein dnaJ 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.76 | 0.269 | 11.1 | -0.677 | 0.538 | 0.979 | -0.622 | -1.51 | -0.721 | 22.1 | 1.331 | 1956 | -- | -- |
| 32.96 | 0.267 | 11.1 | -0.722 | 0.547 | 0.613 | -0.636 | -- | -0.726 | 22.1 | 1.525 | 1962 | -- | -- |
| 34.27 | 0.273 | 11.1 | -0.644 | 0.542 | 0.974 | -- | -1.43 | -0.721 | 22.1 | 1.244 | 2033 | -- | -- |
| 34.41 | 0.273 | 11.1 | -0.705 | 0.539 | 0.583 | -- | -- | -0.718 | 22.1 | 1.672 | 1969 | -- | -- |
| 51.43 | 0.334 | 11.1 | -0.674 | -- | 0.693 | -- | -0.761 | -0.723 | -- | 1.033 | 2488 | -- | -- |
| 36.67 | 0.284 | 11.1 | -0.881 | 0.52 | -- | -0.703 | -- | -0.686 | 22.1 | -- | -- | -- | -- |
| 38.63 | 0.291 | 11.1 | -0.853 | 0.524 | -- | -- | -- | -0.684 | 22.1 | -- | -- | -- | -- |
| 51.54 | 0.334 | 11.1 | -0.698 | -- | 0.494 | -- | -- | -0.717 | -- | 1 | 2491 | -- | -- |
| 45.56 | 0.314 | 11.1 | -- | 0.551 | 0.903 | -- | -- | -0.667 | 22.1 | 2.096 | 2080 | -- | -- |
| 55.22 | 0.347 | 11.1 | -0.846 | -- | -- | -- | -- | -0.683 | -- | -- | -- | -- | -- |
| 57.81 | 0.356 | 11.1 | -- | 0.521 | -- | -- | -- | -0.589 | 22 | -- | -- | -- | -- |
| 62.89 | 0.369 | 11.1 | -- | -- | 0.8 | -- | -- | -0.667 | -- | 1.455 | 2569 | -- | -- |
| 74.11 | 0.402 | 11.1 | -- | -- | -- | -- | -- | -0.589 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.56 | wind | 1e+00 | 14400 | > th | dose independent | rect. | 2 | 4 |
| 4 | 29.78 | wind | 1e+00 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 37 | 30.68 | wind | 1e+00 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 64 | 30.95 | wind | 1e+00 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 78 | 31.10 | humidity | 7e+01 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 80 | 31.11 | wind | 1e+00 | 43200 | < th | dose dependent | rect. | 2 | 11 |
| 106 | 31.30 | wind | 1e+00 | 43200 | < th | dose independent | rect. | 2 | 11 |
| 126 | 31.40 | wind | 3e+00 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 145 | 31.50 | humidity | 8e+01 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 181 | 31.64 | humidity | 8e+01 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 188 | 31.68 | wind | 3e+00 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 189 | 31.69 | humidity | 8e+01 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 191 | 31.69 | precipitation | 1e-01 | 14400 | > th | dose independent | rect. | 6 | 11 |
| 192 | 31.69 | precipitation | 1e-01 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 193 | 31.69 | precipitation | 1e-01 | 14400 | > th | dose independent | rect. | 4 | 14 |
| 194 | 31.69 | precipitation | 1e-01 | 14400 | < th | dose independent | rect. | 4 | 14 |
| 195 | 31.69 | precipitation | 1e-01 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 196 | 31.69 | precipitation | 1e-01 | 14400 | < th | dose dependent | rect. | 6 | 11 |
| 197 | 31.69 | precipitation | 1e-01 | 14400 | < th | dose dependent | rect. | 4 | 14 |
| 231 | 31.81 | humidity | 8e+01 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 243 | 31.83 | wind | 1e+00 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 246 | 31.84 | wind | 3e+00 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 259 | 31.88 | wind | 1e+00 | 43200 | < th | dose independent | sin | 7 | NA |
| 266 | 31.89 | humidity | 8e+01 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 279 | 31.92 | wind | 5e+00 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 301 | 31.97 | wind | 1e+00 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 332 | 32.02 | atmosphere | 1e+03 | 90 | > th | dose independent | rect. | 17 | 23 |
| 339 | 32.02 | wind | 1e+00 | 43200 | < th | dose dependent | rect. | 2 | 15 |
| 342 | 32.03 | wind | 1e+00 | 14400 | > th | dose independent | rect. | 16 | 14 |
| 344 | 32.03 | wind | 1e+00 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 361 | 32.06 | wind | 1e+00 | 43200 | > th | dose independent | sin | 7 | NA |
| 362 | 32.06 | wind | 3e+00 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 373 | 32.08 | precipitation | 1e-01 | 14400 | > th | dose dependent | sin | 1 | NA |
| 382 | 32.09 | precipitation | 1e-01 | 14400 | > th | dose dependent | rect. | 4 | 16 |
| 411 | 32.14 | precipitation | 1e-01 | 14400 | > th | dose independent | sin | 0 | NA |
| 412 | 32.14 | precipitation | 1e-01 | 14400 | < th | dose independent | sin | 0 | NA |
| 415 | 32.14 | precipitation | 1e-01 | 14400 | < th | dose dependent | sin | 0 | NA |
| 426 | 32.15 | precipitation | 1e-01 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 464 | 32.21 | humidity | 8e+01 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 474 | 32.22 | wind | 1e+00 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 505 | 32.27 | precipitation | 1e-01 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 558 | 32.31 | wind | 1e+00 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 595 | 32.35 | wind | 1e+00 | 43200 | < th | dose dependent | sin | 6 | NA |
| 619 | 32.37 | precipitation | 1e-01 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 621 | 32.38 | wind | 1e+00 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 624 | 32.38 | precipitation | 1e-01 | 14400 | < th | dose independent | rect. | 12 | 5 |
| 630 | 32.38 | precipitation | 1e-01 | 14400 | < th | dose dependent | rect. | 12 | 5 |
| 649 | 32.41 | precipitation | 1e-01 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 698 | 32.45 | wind | 3e+00 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 716 | 32.47 | precipitation | 1e-01 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 745 | 32.50 | precipitation | 1e-01 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 746 | 32.50 | precipitation | 1e-01 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 755 | 32.50 | precipitation | 1e-01 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 790 | 32.53 | precipitation | 1e-01 | 14400 | > th | dose dependent | rect. | 12 | 5 |
| 815 | 32.56 | precipitation | 1e-01 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 816 | 32.56 | precipitation | 1e-01 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 821 | 32.56 | precipitation | 1e-01 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 822 | 32.56 | precipitation | 1e-01 | 4320 | < th | dose dependent | rect. | 19 | 1 |
| 907 | 32.61 | wind | 1e+00 | 43200 | > th | dose dependent | rect. | 5 | 3 |
| 950 | 32.64 | precipitation | 1e-01 | 1440 | > th | dose independent | rect. | 24 | 17 |