Os03g0811300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Clathrin assembly small subunit protein AP19 (Clathrin assembly protein AP19, small subunit).
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Os03g0811300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Clathrin assembly small subunit protein AP19 (Clathrin assembly protein AP19, small subunit).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 132.95 | 0.542 | 2.8 | 0.014 | 0.0421 | 3.45 | 0.497 | 15.5 | 0.0818 | 8.96 | 5 | 29 | 21 | 0.934 |
| 147.25 | 0.565 | 2.77 | 0.0966 | 0.0339 | 2.41 | 0.291 | -- | 0.114 | 7.04 | 5.1 | 29 | 20.4 | 1.25 |
| 133.79 | 0.539 | 2.8 | 0.014 | 0.0421 | 3.45 | -- | 15.5 | 0.0818 | 7.49 | 5 | 29 | 21 | 0.934 |
| 146.48 | 0.564 | 2.78 | 0.0469 | 0.0787 | 2.14 | -- | -- | 0.0953 | 6.79 | 5.07 | 28 | 21.2 | 0.422 |
| 133.87 | 0.539 | 2.8 | 0.0272 | -- | 3.43 | -- | 15 | 0.085 | -- | 5.011 | 28 | 21 | 0.936 |
| 157.34 | 0.588 | 2.79 | 0.0316 | 0.0299 | -- | -0.0543 | -- | 0.074 | 0.348 | -- | -- | -- | -- |
| 157.35 | 0.587 | 2.79 | 0.0336 | 0.0303 | -- | -- | -- | 0.0742 | 0.791 | -- | -- | -- | -- |
| 146.51 | 0.564 | 2.78 | 0.0147 | -- | 2.07 | -- | -- | 0.0993 | -- | 5.088 | 28 | 21.2 | 0.417 |
| 146.39 | 0.564 | 2.78 | -- | 0.0611 | 2.09 | -- | -- | 0.0941 | 8.56 | 5.032 | 28 | 21.2 | 0.433 |
| 157.41 | 0.586 | 2.79 | 0.0347 | -- | -- | -- | -- | 0.0748 | -- | -- | -- | -- | -- |
| 157.38 | 0.587 | 2.79 | -- | 0.0308 | -- | -- | -- | 0.0705 | 0.84 | -- | -- | -- | -- |
| 146.51 | 0.564 | 2.79 | -- | -- | 2.05 | -- | -- | 0.0961 | -- | 5.013 | 28 | 21.2 | 0.429 |
| 157.44 | 0.586 | 2.79 | -- | -- | -- | -- | -- | 0.0709 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 134.08 | wind | 5.0 | 30 | > th | dose independent | rect. | 21 | 1 |
| 5 | 134.54 | wind | 5.0 | 30 | > th | dose dependent | rect. | 21 | 1 |
| 24 | 140.46 | wind | 5.0 | 30 | > th | dose dependent | rect. | 21 | 8 |
| 58 | 144.06 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 22 | 1 |
| 63 | 144.11 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 22 | 1 |
| 80 | 144.89 | wind | 7.0 | 30 | > th | dose independent | rect. | 21 | 8 |
| 92 | 145.03 | humidity | 80.0 | 10 | < th | dose independent | rect. | 21 | 1 |
| 138 | 145.22 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 21 | 1 |
| 143 | 145.22 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 21 | 1 |
| 150 | 145.46 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 21 | 1 |
| 162 | 145.46 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 21 | 1 |
| 201 | 145.82 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 20 | 3 |
| 222 | 146.14 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 20 | 1 |
| 232 | 146.38 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 21 | 5 |
| 236 | 146.38 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 21 | 5 |
| 264 | 146.58 | temperature | 25.0 | 90 | < th | dose independent | rect. | 20 | 1 |
| 287 | 146.93 | wind | 7.0 | 30 | > th | dose independent | rect. | 18 | 11 |
| 296 | 147.09 | wind | 7.0 | 30 | > th | dose independent | rect. | 18 | 4 |
| 392 | 148.55 | wind | 7.0 | 30 | > th | dose dependent | sin | 11 | NA |
| 414 | 148.95 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 7 | 16 |
| 442 | 149.09 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 7 | 16 |
| 557 | 149.63 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 18 | 1 |
| 665 | 149.83 | temperature | 20.0 | 270 | < th | dose independent | rect. | 18 | 1 |
| 796 | 150.38 | wind | 1.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 830 | 150.45 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 18 | 5 |
| 844 | 150.51 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 10 | 4 |
| 863 | 150.57 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 874 | 150.61 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 13 | 1 |
| 886 | 150.65 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 898 | 150.70 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 21 | 2 |
| 904 | 150.73 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 12 | 10 |
| 914 | 150.77 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 924 | 150.79 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 21 | 1 |
| 933 | 150.84 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 10 | 20 |
| 942 | 150.86 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 10 | 13 |
| 945 | 150.87 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 10 | 9 |
| 964 | 150.89 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 13 | 10 |
| 993 | 150.99 | precipitation | 0.1 | 90 | < th | dose independent | sin | 18 | NA |
| 996 | 150.99 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 18 | NA |