Os03g0809100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Major facilitator superfamily protein.
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Os03g0809100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Major facilitator superfamily protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.67 | 0.303 | 10.7 | 0.97 | 1 | -0.691 | 0.172 | 0.186 | 0.591 | 19.9 | 77.81 | 1303 | -- | -- |
| 41.71 | 0.301 | 10.7 | 0.963 | 1 | -0.678 | 0.163 | -- | 0.593 | 19.9 | 78.18 | 1289 | -- | -- |
| 41.74 | 0.301 | 10.7 | 0.968 | 1.01 | -0.696 | -- | 0.211 | 0.591 | 19.9 | 77.6 | 1281 | -- | -- |
| 41.79 | 0.301 | 10.7 | 0.949 | 1.01 | -0.678 | -- | -- | 0.591 | 19.9 | 78.1 | 1281 | -- | -- |
| 94.52 | 0.453 | 10.6 | 0.943 | -- | -0.698 | -- | 0.195 | 0.595 | -- | 82.58 | 1388 | -- | -- |
| 52.38 | 0.339 | 10.7 | 0.832 | 1 | -- | 0.146 | -- | 0.624 | 19.5 | -- | -- | -- | -- |
| 52.44 | 0.339 | 10.7 | 0.829 | 1 | -- | -- | -- | 0.624 | 19.5 | -- | -- | -- | -- |
| 94.55 | 0.453 | 10.6 | 0.925 | -- | -0.68 | -- | -- | 0.589 | -- | 82.33 | 1391 | -- | -- |
| 63.17 | 0.37 | 10.7 | -- | 0.998 | -0.611 | -- | -- | 0.547 | 20 | 94 | 1263 | -- | -- |
| 106.01 | 0.481 | 10.6 | 0.814 | -- | -- | -- | -- | 0.609 | -- | -- | -- | -- | -- |
| 70.56 | 0.393 | 10.7 | -- | 0.993 | -- | -- | -- | 0.532 | 19.6 | -- | -- | -- | -- |
| 115 | 0.499 | 10.7 | -- | -- | -0.621 | -- | -- | 0.548 | -- | 94 | 1390 | -- | -- |
| 123.49 | 0.519 | 10.7 | -- | -- | -- | -- | -- | 0.518 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.61 | humidity | 80 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 3 | 41.74 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 4 | 41.80 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 5 | 41.82 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 7 |
| 6 | 41.88 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 5 |
| 7 | 41.89 | humidity | 50 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 21 | 42.17 | humidity | 80 | 1440 | < th | dose dependent | sin | 1 | NA |
| 26 | 42.18 | humidity | 80 | 1440 | < th | dose dependent | rect. | 7 | 13 |
| 28 | 42.19 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 39 | 42.20 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 22 |
| 60 | 42.23 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 20 |
| 61 | 42.23 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 174 | 42.35 | humidity | 80 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 176 | 42.36 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 204 | 42.38 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 253 | 42.48 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 327 | 42.60 | humidity | 50 | 1440 | > th | dose dependent | sin | 1 | NA |
| 487 | 42.93 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 509 | 42.97 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 21 |
| 519 | 42.98 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 11 |
| 523 | 42.98 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 19 |
| 579 | 43.10 | humidity | 70 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 673 | 43.21 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |
| 674 | 43.21 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 14 |
| 693 | 43.21 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 22 |
| 698 | 43.21 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 702 | 43.22 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 703 | 43.22 | humidity | 80 | 1440 | < th | dose independent | sin | 2 | NA |
| 870 | 43.26 | humidity | 70 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 957 | 43.32 | humidity | 70 | 1440 | > th | dose independent | sin | 19 | NA |