BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0809100 Os03g0809100|AK070392
(470 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G36790.1 | chr4:17336360-17338304 FORWARD LENGTH=490 597 e-171
AT2G18590.1 | chr2:8069988-8072866 FORWARD LENGTH=474 478 e-135
AT5G10190.1 | chr5:3199205-3201140 FORWARD LENGTH=489 322 4e-88
AT1G78130.1 | chr1:29400171-29401814 FORWARD LENGTH=491 302 3e-82
>AT4G36790.1 | chr4:17336360-17338304 FORWARD LENGTH=490
Length = 489
Score = 597 bits (1539), Expect = e-171, Method: Compositional matrix adjust.
Identities = 295/465 (63%), Positives = 363/465 (78%), Gaps = 14/465 (3%)
Query: 7 FFGFSVSLILINLASIMERADENLLPAVYKEVSAAFNAGPTDLGYLTFLMNFLKSIASPL 66
F G S+SLILINLA+IMERADENLLP+VYKEVS AFNAGP+DLGYLTF+ NF++ +ASPL
Sbjct: 38 FLGVSISLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFVRNFVQGLASPL 97
Query: 67 AGVLALQYDRPAVLAIGTVFWAVSTGAVGVSQYFQQVAFWRAVNGLGLAIVIPALQSFIA 126
AGVL + YDRP VLAIGT WA+ST AVG S YF QVA WRAVNG GLAIVIPALQSFIA
Sbjct: 98 AGVLVITYDRPIVLAIGTFCWALSTAAVGASSYFIQVALWRAVNGFGLAIVIPALQSFIA 157
Query: 127 DSYKDGTRGAGFXXXXXXXXXXXXXXXXXATIMAGRDYWGLPGWRFAFLMVAFLSLLIGL 186
DSYKDG RGAGF AT+MAG ++WG+PGWR AF+M+A LS +IGL
Sbjct: 158 DSYKDGARGAGFGMLNLIGTIGGIGGGVVATVMAGSEFWGIPGWRCAFIMMAALSAVIGL 217
Query: 187 LVYFYTVDPRKVSPSHFGDDEDHHERSHLIGNGIFPPQSIWKDSWIAARSVMKVRTFQII 246
LV+ + VDPRK + ER L+ + + S+W DS AA+SV+KV TFQII
Sbjct: 218 LVFLFVVDPRK-----------NIEREELMAHKM-NSNSVWNDSLAAAKSVVKVSTFQII 265
Query: 247 VLQGIVGSLPWTAVVFFTMWFELIGFDNSSSAALNSMFAIGCASGSFLGGVIADRLSKYY 306
V QGI+GS PWTA+VFFTMWFELIGFD++ +AAL +FA G A G+ +GG+IAD++S+ Y
Sbjct: 266 VAQGIIGSFPWTAMVFFTMWFELIGFDHNQTAALLGVFATGGAIGTLMGGIIADKMSRIY 325
Query: 307 PDSARIMCAQFSAFMGIPFSWILLTVIPQSVDYWSAFAVTLFLMGITISWCATCANNPMF 366
P+S R+MCAQFSAFMGIPFS ILL VIPQS +S F++TLFLMG+TI+WC + N PMF
Sbjct: 326 PNSGRVMCAQFSAFMGIPFSIILLKVIPQSTSSYSIFSITLFLMGLTITWCGSAVNAPMF 385
Query: 367 AEVVPPKHRTMIYAFDRAFEGSFASLAAPAVGMVTEKIYGYNAKTVN-LENGSVAGAYAL 425
AEVVPP+HRTMIYAFDRAFEGSF+S AAP VG+++EK++GY+++ ++ L+ SV A AL
Sbjct: 386 AEVVPPRHRTMIYAFDRAFEGSFSSFAAPLVGILSEKLFGYDSRGIDPLKGSSVREADAL 445
Query: 426 SRGLLTMMIVPFGLCFLFYSPLYFVFKRDRENVRRLPSVKEQELI 470
S+GLL+MM VPFGLC L Y+PL+FVF++DREN ++ S KE E+I
Sbjct: 446 SKGLLSMMAVPFGLCCLCYTPLHFVFQKDRENA-KIASSKETEMI 489
>AT2G18590.1 | chr2:8069988-8072866 FORWARD LENGTH=474
Length = 473
Score = 478 bits (1231), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/455 (50%), Positives = 324/455 (71%), Gaps = 4/455 (0%)
Query: 18 NLASIMERADENLLPAVYKEVSAAFNAGPTDLGYLTFLMNFLKSIASPLAGVLALQYDRP 77
NLA++M+RADE L+P+ KE+ AF+A +D+G L+F+ N ++ +ASPLAG+ A+ YDRP
Sbjct: 19 NLATMMQRADEKLIPSTAKELKEAFHAKLSDIGLLSFIRNIVQGLASPLAGLFAISYDRP 78
Query: 78 AVLAIGTVFWAVSTGAVGVSQYFQQVAFWRAVNGLGLAIVIPALQSFIADSYKDGTRGAG 137
V A G+ FW ST A GVS+YF QV A NG+G AIV P LQS IADS+K+ +RG G
Sbjct: 79 TVFAFGSFFWVSSTVATGVSRYFIQVTLGVAFNGVGHAIVYPVLQSIIADSFKESSRGFG 138
Query: 138 FXXXXXXXXXXXXXXXXXATIMAGRDYWGLPGWRFAFLMVAFLSLLIGLLVYFYTVDPR- 196
F T+MAG D++G+ GWR AF++ A LS ++G+LV+F+ DPR
Sbjct: 139 FGLWNLIGTVGGIGGTVVPTVMAGHDFFGISGWRCAFILSATLSTIVGILVFFFVSDPRE 198
Query: 197 KVSPSHFGDDEDHHERSHLIGNGIF--PPQSIWKDSWIAARSVMKVRTFQIIVLQGIVGS 254
K + S +D HER G + P S+WK+SW+A + V K+RTFQIIVLQGIVGS
Sbjct: 199 KKTSSVIVHHDDQHERDENNGGTMMESPSSSVWKESWVAIKDVTKLRTFQIIVLQGIVGS 258
Query: 255 LPWTAVVFFTMWFELIGFDNSSSAALNSMFAIGCASGSFLGGVIADRLSKYYPDSARIMC 314
+PW A++F+TMWFELIGFD++ +A LN +FA G A GS +GG+IAD++S+ +P+S R++C
Sbjct: 259 VPWNAMLFWTMWFELIGFDHNQAALLNGIFATGQAIGSLVGGIIADKMSRVFPNSGRLIC 318
Query: 315 AQFSAFMGIPFSWILLTVIPQSVDYWSAFAVTLFLMGITISWCATCANNPMFAEVVPPKH 374
AQFS FMG FS +LL +IPQSV+ + F VTLFLMG+TI+WC N+P+ AE+VP KH
Sbjct: 319 AQFSVFMGAMFSIVLLRMIPQSVNSFYIFLVTLFLMGLTITWCGPAINSPILAEIVPAKH 378
Query: 375 RTMIYAFDRAFEGSFASLAAPAVGMVTEKIYGYNAKTVNLENGSVAGAYALSRGLLTMMI 434
RTM+YAFDRA E +F+S AP VG+++EK++G++AK ++ N S A AL +G++ MM
Sbjct: 379 RTMVYAFDRALEVTFSSFGAPLVGIMSEKLFGFDAKGIDHVNDSGREAEALGKGIMWMMA 438
Query: 435 VPFGLCFLFYSPLYFVFKRDRENVRRLPSVKEQEL 469
+PFGLC L Y+PL+F+F++DR+ + R S +E E+
Sbjct: 439 LPFGLCCLCYTPLHFLFRKDRK-IDRTTSSREVEM 472
>AT5G10190.1 | chr5:3199205-3201140 FORWARD LENGTH=489
Length = 488
Score = 322 bits (824), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 179/466 (38%), Positives = 265/466 (56%), Gaps = 22/466 (4%)
Query: 11 SVSLILINLASIMERADENLLPAVYKEVSAAFNAGPTDLGYLTFLMNFLKSIASPLAGVL 70
+++L+L+ LA IMERADE+LLP VYKEV A + PT LG LT + ++S PLA L
Sbjct: 5 TLTLVLVYLAGIMERADESLLPGVYKEVGDALHVDPTALGTLTLFRSIVQSSCYPLAAYL 64
Query: 71 ALQYDRPAVLAIGTVFWAVSTGAVGVSQYFQQVAFWRAVNGLGLAIVIPALQSFIADSYK 130
+ +++R V+A+G WA +T V VS F QVA R +NG+GLAIV PA+QS +ADS
Sbjct: 65 SSRHNRAHVIALGAFLWATATFLVAVSTTFFQVAVSRGLNGIGLAIVTPAIQSLVADSTD 124
Query: 131 DGTRGAGFXXXXXXXXXXXXXXXXXATIMAGRDYWGLPGWRFAFLMVAFLSLLIGLLVYF 190
D RG F + + A + + G+ GWR AFL+VA +S+++G+LV
Sbjct: 125 DYNRGMAFGWLGFTSNIGSILGYVCSILFASKSFNGVAGWRIAFLLVAVVSVIVGILVRL 184
Query: 191 YTVDPRKVSPSHFGDDE-DHHERSHLIGNGIFPPQSIWKDSWIAARSVMKVRTFQIIVLQ 249
+ DP H+ D + H + P S +D A+ V+K+ +FQI V Q
Sbjct: 185 FATDP------HYSDRKITKHVKDK-------PFWSDIRDLLKEAKMVIKIPSFQIFVAQ 231
Query: 250 GIVGSLPWTAVVFFTMWFELIGFDNSSSAALNSMFAIGCASGSFLGGVIADRLSKYYPDS 309
G+ GS PW+A+ F +W ELIGF + ++A L ++F I C+ G GG + D L+K +P+
Sbjct: 232 GVSGSFPWSALAFAPLWLELIGFSHKTTAVLVTLFTISCSLGGLFGGYMGDTLAKKFPNG 291
Query: 310 ARIMCAQFSAFMGIPFSWILLTVIPQSVDYWSAFAVTLFLMGITISWCATCANNPMFAEV 369
RI +Q S+ IP + ILL +P + + L +MG+ ISW N P+FAE+
Sbjct: 292 GRIFLSQVSSGSAIPLAAILLIGLPDDPSTAFSHGLVLVIMGLCISWNGAATNGPIFAEI 351
Query: 370 VPPKHRTMIYAFDRAFEGSFASLAAPAVGMVTEKIYGY------NAKTVNLENGSVAGAY 423
VP + RT IYA DR+FE AS A P VGM+ + IYGY + +V ++ A A
Sbjct: 352 VPERARTSIYALDRSFESILASFAPPIVGMLAQNIYGYKPIPEGSTSSVKIDTDR-ANAA 410
Query: 424 ALSRGLLTMMIVPFGLCFLFYSPLYFVFKRDRENVRRLPSVKEQEL 469
+L++ L T + +P +C YS LY + RDR+ ++ ++ E E+
Sbjct: 411 SLAKALYTSIGIPMVICCTIYSFLYCTYPRDRDRA-KMQALIESEM 455
>AT1G78130.1 | chr1:29400171-29401814 FORWARD LENGTH=491
Length = 490
Score = 302 bits (773), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 178/465 (38%), Positives = 261/465 (56%), Gaps = 22/465 (4%)
Query: 1 MRAKKMFFGFSVSLILINLASIMERADENLLPAVYKEVSAAFNAGPTDLGYLTFLMNFLK 60
M+A+ M +L+L+NLA IMERADE+LLP VYKEV A + PT LG LT L + ++
Sbjct: 1 MKAETM------TLLLVNLAGIMERADESLLPGVYKEVGLALHTDPTGLGSLTLLRSMVQ 54
Query: 61 SIASPLAGVLALQYDRPAVLAIGTVFWAVSTGAVGVSQYFQQVAFWRAVNGLGLAIVIPA 120
+ PLA +A++++R V+A+G W+ +T V S F QVA RA+NG+GLA+V PA
Sbjct: 55 AACYPLAAYMAIRHNRAHVIALGAFLWSAATFLVAFSSTFFQVAVSRALNGIGLALVAPA 114
Query: 121 LQSFIADSYKDGTRGAGFXXXXXXXXXXXXXXXXXATIMAGRDYWGLPGWRFAFLMVAFL 180
+QS +ADS D RG F + ++A + G+PGWR AF +V +
Sbjct: 115 IQSLVADSTDDANRGTAFGWLQLTANIGSILGGLCSVLIAPLTFMGIPGWRVAFHIVGVI 174
Query: 181 SLLIGLLVYFYTVDPRKVSPSHFGDDEDHHERSHLIGNGIFPPQSIWKDSWIAARSVMKV 240
S+++G+LV + DP V G D + S P + KD A +V+K+
Sbjct: 175 SVIVGVLVRVFANDPHFVKD---GVDVSNQPGSRK------PFCTEVKDLVREADTVIKI 225
Query: 241 RTFQIIVLQGIVGSLPWTAVVFFTMWFELIGFDNSSSAALNSMFAIGCASGSFLGGVIAD 300
R+FQIIV QG+ GS PW+A+ F MW ELIGF + +A L +F + G GG + D
Sbjct: 226 RSFQIIVAQGVTGSFPWSALSFAPMWLELIGFSHGKTAFLMGLFVAASSLGGLFGGKMGD 285
Query: 301 RLSKYYPDSARIMCAQFSAFMGIPFSWILLTVIPQSVDYWSAFAVTLFLMGITISWCATC 360
LS P+S RI+ AQ S+ IP + ILL V+P + + L L+G+ +SW A
Sbjct: 286 FLSTRLPNSGRIILAQISSASAIPLAAILLLVLPDDPSTAAIHGLILVLLGLFVSWNAPA 345
Query: 361 ANNPMFAEVVPPKHRTMIYAFDRAFEGSFASLAAPAVGMVTEKIYGY------NAKTVNL 414
NNP+FAE+VP K RT +YA D++FE +S A P VG++ + +YGY ++++ +
Sbjct: 346 TNNPIFAEIVPEKSRTSVYALDKSFESILSSFAPPIVGILAQHVYGYKPIPEGSSRSTEI 405
Query: 415 ENGSVAGAYALSRGLLTMMIVPFGLCFLFYSPLYFVFKRDRENVR 459
A +L++ L T + +P C YS LY + DR+ R
Sbjct: 406 ATDR-ENAASLAKALYTSIGLPMAACCFIYSFLYRSYPLDRDRAR 449
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.327 0.140 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,515,023
Number of extensions: 376631
Number of successful extensions: 1196
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1185
Number of HSP's successfully gapped: 4
Length of query: 470
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 368
Effective length of database: 8,310,137
Effective search space: 3058130416
Effective search space used: 3058130416
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 113 (48.1 bits)