Os03g0808500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant lipid transfer protein/Par allergen family protein.
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Os03g0808500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant lipid transfer protein/Par allergen family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.53 | 0.424 | 9.47 | -0.331 | 0.725 | -0.551 | 0.0739 | -0.996 | -0.454 | 20 | 21.3 | 814 | -- | -- |
| 83.91 | 0.427 | 9.44 | -0.095 | 0.727 | -0.483 | -0.322 | -- | -0.399 | 19.8 | 21.29 | 589 | -- | -- |
| 81.54 | 0.421 | 9.47 | -0.326 | 0.725 | -0.549 | -- | -0.969 | -0.452 | 20 | 21.32 | 813 | -- | -- |
| 84.17 | 0.427 | 9.44 | -0.0891 | 0.728 | -0.479 | -- | -- | -0.403 | 19.8 | 21.27 | 589 | -- | -- |
| 105.95 | 0.479 | 9.46 | -0.398 | -- | -0.527 | -- | -1.22 | -0.483 | -- | 21.4 | 1414 | -- | -- |
| 92.28 | 0.45 | 9.47 | -0.266 | 0.643 | -- | -0.294 | -- | -0.532 | 19.7 | -- | -- | -- | -- |
| 92.52 | 0.45 | 9.47 | -0.258 | 0.643 | -- | -- | -- | -0.533 | 19.7 | -- | -- | -- | -- |
| 108.95 | 0.486 | 9.42 | -0.0883 | -- | -0.431 | -- | -- | -0.411 | -- | 21.73 | 1498 | -- | -- |
| 84.36 | 0.428 | 9.44 | -- | 0.738 | -0.501 | -- | -- | -0.398 | 19.8 | 21.3 | 615 | -- | -- |
| 114.82 | 0.501 | 9.45 | -0.267 | -- | -- | -- | -- | -0.542 | -- | -- | -- | -- | -- |
| 94.28 | 0.454 | 9.46 | -- | 0.645 | -- | -- | -- | -0.504 | 19.7 | -- | -- | -- | -- |
| 109.13 | 0.487 | 9.42 | -- | -- | -0.458 | -- | -- | -0.394 | -- | 21.74 | 1498 | -- | -- |
| 116.7 | 0.504 | 9.44 | -- | -- | -- | -- | -- | -0.513 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.30 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 10 |
| 4 | 78.22 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 20 | 17 |
| 8 | 78.76 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 9 | 78.85 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 11 | 78.98 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 15 | 79.12 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 19 |
| 18 | 79.17 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 10 |
| 23 | 79.30 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 34 | 79.54 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 43 | 79.70 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 10 |
| 52 | 79.85 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 24 | 16 |
| 68 | 80.03 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 75 | 80.11 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 80 | 80.16 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 92 | 80.27 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 94 | 80.30 | wind | 9.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 97 | 80.31 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 6 | 7 |
| 124 | 80.56 | wind | 7.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 128 | 80.58 | temperature | 15.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 157 | 80.80 | wind | 9.0 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 166 | 80.86 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 169 | 80.87 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 8 |
| 176 | 80.93 | temperature | 30.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 190 | 81.04 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 191 | 81.04 | temperature | 25.0 | 270 | < th | dose dependent | sin | 5 | NA |
| 194 | 81.05 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 205 | 81.12 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 211 | 81.14 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 228 | 81.19 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 4 | 12 |
| 229 | 81.20 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 236 | 81.23 | temperature | 25.0 | 90 | > th | dose independent | rect. | 23 | 16 |
| 270 | 81.37 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 273 | 81.39 | temperature | 15.0 | 10 | > th | dose dependent | sin | 4 | NA |
| 276 | 81.40 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 295 | 81.53 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 15 |
| 299 | 81.54 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 9 |
| 300 | 81.55 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 3 |
| 303 | 81.57 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 310 | 81.60 | wind | 3.0 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 323 | 81.66 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 324 | 81.66 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 20 |
| 328 | 81.67 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 330 | 81.67 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 331 | 81.68 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 335 | 81.69 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 350 | 81.74 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 355 | 81.75 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 383 | 81.81 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 411 | 81.90 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 441 | 81.97 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 476 | 82.06 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 494 | 82.09 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 496 | 82.09 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 7 |
| 499 | 82.10 | wind | 3.0 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 516 | 82.14 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 526 | 82.16 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 6 |
| 533 | 82.17 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 8 | 8 |
| 540 | 82.18 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 543 | 82.19 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 567 | 82.24 | wind | 3.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 569 | 82.24 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 570 | 82.24 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 578 | 82.25 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 590 | 82.28 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 15 |
| 622 | 82.35 | temperature | 20.0 | 10 | > th | dose independent | rect. | 23 | 17 |
| 646 | 82.40 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 12 |
| 657 | 82.42 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 24 | 3 |
| 677 | 82.46 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 684 | 82.46 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 747 | 82.57 | wind | 3.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 758 | 82.58 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 800 | 82.63 | temperature | 25.0 | 270 | < th | dose independent | rect. | 24 | 11 |
| 816 | 82.65 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 827 | 82.66 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 859 | 82.71 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 4 |
| 862 | 82.71 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 16 |
| 879 | 82.73 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 883 | 82.74 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 911 | 82.77 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 16 | 7 |