Os03g0807200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1639 family protein.
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Os03g0807200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1639 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.4 | 0.259 | 9.91 | -0.0526 | 0.563 | 0.382 | 0.443 | -0.978 | -0.0971 | 15.4 | 19.98 | 1242 | -- | -- |
| 31.96 | 0.263 | 9.91 | -0.137 | 0.574 | 0.343 | 0.313 | -- | -0.116 | 15.4 | 19.98 | 1264 | -- | -- |
| 30.96 | 0.259 | 9.91 | -0.0541 | 0.561 | 0.371 | -- | -0.831 | -0.0976 | 15.3 | 20 | 1262 | -- | -- |
| 32.14 | 0.264 | 9.91 | -0.14 | 0.556 | 0.32 | -- | -- | -0.123 | 15.1 | 20 | 1303 | -- | -- |
| 44.66 | 0.313 | 9.93 | -0.201 | -- | -0.375 | -- | -0.00212 | -0.208 | -- | 20 | 1262 | -- | -- |
| 34.56 | 0.276 | 9.93 | -0.183 | 0.607 | -- | 0.239 | -- | -0.199 | 14.6 | -- | -- | -- | -- |
| 34.76 | 0.276 | 9.93 | -0.177 | 0.607 | -- | -- | -- | -0.198 | 14.6 | -- | -- | -- | -- |
| 44.65 | 0.313 | 9.93 | -0.199 | -- | -0.367 | -- | -- | -0.209 | -- | 16.98 | 1296 | -- | -- |
| 32.65 | 0.266 | 9.91 | -- | 0.559 | 0.323 | -- | -- | -0.114 | 15.1 | 19.67 | 1304 | -- | -- |
| 56.36 | 0.351 | 9.93 | -0.203 | -- | -- | -- | -- | -0.213 | -- | -- | -- | -- | -- |
| 35.59 | 0.279 | 9.92 | -- | 0.611 | -- | -- | -- | -0.178 | 14.6 | -- | -- | -- | -- |
| 45.69 | 0.316 | 9.93 | -- | -- | -0.367 | -- | -- | -0.187 | -- | 16.98 | 1296 | -- | -- |
| 57.45 | 0.354 | 9.93 | -- | -- | -- | -- | -- | -0.19 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.49 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 2 | 29.53 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 8 |
| 6 | 29.77 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 12 | 30.10 | radiation | 20 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 21 | 30.33 | radiation | 10 | 1440 | < th | dose dependent | rect. | 8 | 8 |
| 27 | 30.41 | temperature | 20 | 90 | > th | dose independent | rect. | 20 | 10 |
| 29 | 30.45 | temperature | 20 | 90 | < th | dose independent | rect. | 17 | 13 |
| 33 | 30.50 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 15 |
| 34 | 30.51 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 14 |
| 57 | 30.58 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 15 | 15 |
| 58 | 30.58 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 60 | 30.59 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 82 | 30.65 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 83 | 30.65 | temperature | 20 | 10 | < th | dose independent | rect. | 14 | 16 |
| 84 | 30.65 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 102 | 30.70 | temperature | 20 | 10 | < th | dose independent | sin | 11 | NA |
| 152 | 30.80 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 16 | 17 |
| 261 | 31.00 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 22 |
| 306 | 31.04 | radiation | 20 | 1440 | < th | dose dependent | rect. | 8 | 16 |
| 307 | 31.04 | radiation | 20 | 1440 | < th | dose dependent | rect. | 8 | 18 |
| 376 | 31.11 | temperature | 20 | 90 | < th | dose independent | rect. | 23 | 6 |
| 438 | 31.14 | radiation | 10 | 1440 | < th | dose dependent | sin | 23 | NA |
| 458 | 31.16 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 484 | 31.18 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 16 | 15 |
| 498 | 31.20 | temperature | 20 | 10 | > th | dose independent | sin | 9 | NA |
| 512 | 31.20 | atmosphere | 1000 | 10 | > th | dose dependent | rect. | 16 | 17 |
| 614 | 31.29 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 19 |
| 622 | 31.29 | radiation | 20 | 1440 | < th | dose dependent | rect. | 22 | 18 |
| 675 | 31.33 | temperature | 20 | 90 | > th | dose independent | sin | 10 | NA |
| 710 | 31.35 | radiation | 10 | 1440 | > th | dose independent | sin | 2 | NA |
| 745 | 31.36 | temperature | 20 | 90 | > th | dose independent | rect. | 20 | 19 |
| 966 | 31.45 | temperature | 15 | 10 | > th | dose dependent | rect. | 20 | 8 |
| 984 | 31.46 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 18 | 15 |