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Os03g0803800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.38 (0.0486) R2 : 0.444
β1 : 3.46 (0.3) R2dD : 0.87 R2D : -0.102
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.69 (0.132) R2dE : 0.374 R2E : 0.0289
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 4.83 (0.88) R2dD*E : 0.192 R2D*E : -0.482
γ1 : 0.36 (0.11) R2dN8 : 0.0433 R2N8 : -0.114
σ : 0.669
deviance : 206.53
__
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C
peak time of C : --
E
wheather : temperature
threshold : 26.8
memory length : 2468
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
195.36 0.657 7.38 3.41 0.426 -1.65 -0.025 4.73 0.378 12.8 26.9 2465 -- --
208.47 0.672 7.5 2.21 0.578 -1.28 -0.193 -- 0.22 11.7 25.6 9357 -- --
195.36 0.651 7.38 3.41 0.426 -1.65 -- 4.73 0.378 12.8 26.9 2464 -- --
205.2 0.667 7.51 2.11 0.607 -1.21 -- -- 0.145 12.4 26.5 7719 -- --
206.53 0.669 7.38 3.46 -- -1.69 -- 4.83 0.36 -- 26.8 2468 -- --
263.74 0.761 7.61 1.53 0.679 -- -0.0593 -- -0.301 12.1 -- -- -- --
263.75 0.761 7.61 1.53 0.679 -- -- -- -0.301 12.1 -- -- -- --
226.72 0.701 7.52 2.09 -- -1.31 -- -- 0.178 -- 26.5 8063 -- --
299.65 0.806 7.6 -- 0.594 -0.774 -- -- -0.24 12.2 28.74 7944 -- --
292.81 0.8 7.63 1.51 -- -- -- -- -0.311 -- -- -- -- --
325.4 0.844 7.65 -- 0.659 -- -- -- -0.472 12 -- -- -- --
321.36 0.835 7.6 -- -- -0.828 -- -- -0.215 -- 28.8 8106 -- --
352.76 0.877 7.66 -- -- -- -- -- -0.479 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 194.11 wind 9 43200 < th dose independent rect. 19 20
2 194.54 wind 7 43200 > th dose dependent rect. 19 21
5 194.69 radiation 1 14400 > th dose independent rect. 5 1
6 194.70 wind 9 43200 < th dose independent rect. 17 22
8 194.84 radiation 1 14400 < th dose independent rect. 5 1
14 195.16 wind 9 43200 > th dose independent rect. 19 20
16 195.36 wind 9 43200 > th dose independent rect. 17 22
36 195.99 wind 7 43200 > th dose dependent rect. 8 7
38 196.03 radiation 1 14400 < th dose independent rect. 24 6
39 196.03 radiation 1 14400 < th dose independent rect. 22 8
43 196.06 wind 7 43200 > th dose dependent rect. 5 11
44 196.06 wind 7 43200 > th dose dependent rect. 5 17
45 196.06 wind 7 43200 > th dose dependent rect. 5 22
47 196.07 wind 7 43200 > th dose dependent rect. 5 20
49 196.08 wind 7 43200 > th dose dependent rect. 24 16
58 196.12 radiation 1 14400 < th dose independent rect. 19 11
63 196.14 wind 7 43200 > th dose dependent rect. 2 14
66 196.14 wind 7 43200 > th dose dependent rect. 23 22
71 196.16 wind 7 43200 > th dose dependent rect. 2 19
95 196.24 wind 1 43200 > th dose dependent rect. 6 8
103 196.26 wind 7 43200 > th dose dependent rect. 2 23
118 196.34 wind 7 43200 > th dose dependent no NA NA
127 196.38 wind 7 43200 > th dose dependent sin 1 NA
148 196.61 wind 7 43200 > th dose dependent rect. 10 23
153 196.71 wind 9 43200 < th dose dependent rect. 5 9
155 196.73 wind 9 43200 < th dose independent rect. 2 19
156 196.75 wind 7 43200 > th dose dependent rect. 9 5
167 196.91 wind 3 43200 > th dose dependent sin 3 NA
169 196.92 wind 9 43200 < th dose independent rect. 22 23
170 196.92 wind 7 43200 > th dose dependent rect. 13 23
181 197.03 wind 9 43200 < th dose independent rect. 6 15
197 197.12 wind 9 43200 < th dose independent rect. 8 23
205 197.16 wind 9 43200 < th dose independent rect. 7 21
225 197.23 wind 9 43200 < th dose independent rect. 2 13
238 197.29 wind 9 43200 < th dose independent no NA NA
253 197.33 wind 3 43200 > th dose dependent rect. 24 16
256 197.35 wind 9 43200 < th dose independent rect. 8 7
264 197.36 wind 9 43200 < th dose independent rect. 12 23
295 197.53 wind 9 43200 > th dose independent rect. 8 20
300 197.55 wind 9 43200 < th dose independent rect. 22 17
308 197.60 wind 9 43200 < th dose independent rect. 10 23
321 197.65 wind 3 43200 > th dose dependent rect. 19 21
322 197.66 wind 9 43200 > th dose independent rect. 24 21
331 197.69 wind 9 43200 > th dose independent rect. 7 14
337 197.70 wind 9 43200 < th dose dependent rect. 24 15
345 197.74 wind 9 43200 > th dose independent rect. 2 19
366 197.83 wind 9 43200 > th dose independent rect. 22 23
373 197.85 humidity 90 14400 > th dose dependent rect. 21 4
377 197.86 wind 9 43200 > th dose independent rect. 24 23
378 197.86 humidity 90 14400 > th dose dependent rect. 18 8
386 197.89 humidity 90 14400 > th dose dependent rect. 20 6
409 197.96 wind 9 43200 < th dose dependent rect. 20 19
415 198.00 wind 3 43200 > th dose independent rect. 6 7
442 198.09 wind 9 43200 < th dose dependent sin 4 NA
448 198.12 wind 9 43200 > th dose independent no NA NA
506 198.33 wind 9 43200 > th dose independent rect. 13 23
531 198.44 wind 9 43200 < th dose independent sin 1 NA
543 198.48 wind 9 43200 > th dose dependent sin 17 NA
546 198.49 wind 9 43200 > th dose independent rect. 8 7
598 198.72 wind 9 43200 < th dose independent rect. 9 5
610 198.76 wind 3 43200 > th dose independent rect. 4 10
623 198.83 wind 7 43200 > th dose independent sin 4 NA
636 198.86 wind 9 43200 > th dose independent rect. 13 20
656 198.92 wind 3 43200 > th dose dependent rect. 9 1
667 198.96 wind 3 43200 < th dose independent rect. 6 7
693 199.03 wind 3 43200 > th dose dependent rect. 6 1
695 199.04 wind 9 43200 > th dose independent rect. 24 15
719 199.11 wind 7 43200 > th dose independent rect. 22 18
728 199.12 temperature 25 4320 > th dose dependent rect. 13 8
750 199.17 temperature 25 4320 > th dose dependent rect. 13 1
755 199.19 wind 7 43200 < th dose independent sin 4 NA
770 199.22 wind 9 43200 > th dose independent rect. 2 13
823 199.34 temperature 25 4320 > th dose dependent rect. 13 16
829 199.36 wind 9 43200 > th dose independent sin 0 NA
832 199.36 humidity 90 14400 > th dose dependent sin 15 NA
840 199.38 temperature 25 4320 > th dose dependent rect. 13 14
940 199.60 wind 9 43200 > th dose dependent rect. 19 5
947 199.61 wind 9 43200 > th dose dependent rect. 10 13