BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0803800 Os03g0803800|AK063484
         (642 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G13750.1  | chr4:7975191-7987558 FORWARD LENGTH=2730           231   9e-61
AT1G08300.1  | chr1:2614774-2618823 FORWARD LENGTH=747            207   2e-53

>AT4G13750.1 | chr4:7975191-7987558 FORWARD LENGTH=2730
          Length = 2729

 Score =  231 bits (589), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 154/469 (32%), Positives = 232/469 (49%), Gaps = 65/469 (13%)

Query: 181 RAQAAARKVRDEIIKAGEGVTGWKIAQAVLVALKVDSWGSLGVQLHEVPLLRDLFLVEGK 240
           R   A  K R   + AGE V+  ++++AVL  L+ DSW SLGVQ+ +VP LR L  +EGK
Sbjct: 201 RIDKAVNKTRKLFVAAGESVSSTRVSRAVLEELQADSWRSLGVQMQDVPSLRQLMAIEGK 260

Query: 241 VNTFIHCYVAARKIVSVYDLESEICKNESIGQFEELGLGPFLQHPLVAHYFSVPADLSLV 300
           +N FIHC+V AR+IV+++DLE  IC+NE +  F++L LGP LQHPLV  YF   +  +  
Sbjct: 261 INAFIHCFVGARRIVTLHDLEVAICRNEFVDSFDDLELGPLLQHPLVLLYFPSISSSTGP 320

Query: 301 PKLSSDEIINWLQKFMDN-SKKKITVENFLDYLAEQKSVSGKENLGVRIQSLRLHISFLR 359
            K++S+EII++L  ++     + + ++ FL+++A QKSV+ KE LGVRIQSLR+++SF+ 
Sbjct: 321 VKITSEEIISFLDSYLHTYMTEDVKLDEFLNFVASQKSVTSKEKLGVRIQSLRMYVSFIL 380

Query: 360 QARRTEVSAVKVQGNTSGSGDGSCEKDLVKNRKFHL---SKQALD------ERFSAITSR 410
            A+R E   +KV                  ++K+H+    KQ  D      ER  +    
Sbjct: 381 DAKRQEGETLKVLLTE-------------LHQKYHIPSSKKQQRDKSLTVSERADSFALH 427

Query: 411 IKKLPGINKHIHFXXXXXXXXXXXXXXXXAVDNSESKTGSAAIDNKDVDKRVSSCPYPSK 470
            K   G  KHI F                   +S+       + N +    ++SCPYPS 
Sbjct: 428 HKDYCG--KHIRFDSS----------------SSDENDNVYEVRNLNSSDHINSCPYPSV 469

Query: 471 TEEMERLG-----LKSETSKKPPLDSSKVKESSKKGYTREKRKSEENGSPTSSCKRPKKK 525
            EEM+RLG      K E       DSSK+   S        ++     +  S  K+    
Sbjct: 470 AEEMKRLGGSNKKRKGERRNHEKSDSSKLLRKSPSKLQGHAKQEIPKLADDSEAKKVFSV 529

Query: 526 QKVQMQKHELSPNCFLSIGKLEKFITTWKEACREHPVQQVLELLANYY---AETPXXXXX 582
            +             LS G L  FI+TWK+ C+E  +   +E + ++Y            
Sbjct: 530 DEADFT---------LSEGDLRLFISTWKDTCKELSISTFVEKMLSFYNLGGSEGRAQIK 580

Query: 583 XXXXXXXYPGIGFLNVAVRAMGCGLLDSLYDAINVFNENKSSSNIPDTT 631
                  +P +G LNVAV ++  G+ DS+YD       N   +++ DTT
Sbjct: 581 RAKAMSSFPFVGLLNVAVTSLRRGMWDSIYD-------NFQMTSLSDTT 622



>AT1G08300.1 | chr1:2614774-2618823 FORWARD LENGTH=747
          Length = 746

 Score =  207 bits (526), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 147/481 (30%), Positives = 229/481 (47%), Gaps = 84/481 (17%)

Query: 179 LERAQAAARKVRDEIIKAGEGVTGWKIAQAVLVALKVDSWGSLGVQLHEVPLLRDLFLVE 238
           L R   A    R  +I AG+ V+  +++Q+VL  L+ D+W SLG+ + +VP LR L  +E
Sbjct: 124 LIRIDKAVNNTRKSLIAAGDNVSSTRVSQSVLAQLQADTWRSLGIWMQDVPSLRQLMALE 183

Query: 239 GKVNTFIHCYVAARKIVSVYDLESEICKNESIGQFEELGLGPFLQHPLVAHYF-SVPADL 297
           GK+  FIHC++ AR IV+++DLE  IC+NE +G F++LGLGP LQHPLV  YF SV    
Sbjct: 184 GKIIAFIHCFIGARGIVTLHDLEVAICQNEFVGCFDDLGLGPLLQHPLVLLYFPSVYCST 243

Query: 298 SLVPKLSSDEIINWLQKFMDNSK-KKITVENFLDYLAEQKSVSGKENLGVRIQSLRLHIS 356
           + V K++S+EII+ L  +++      + ++ FLD++AE K+V+ KE LGVRIQ+LR+++S
Sbjct: 244 APV-KITSEEIISLLDSYLNTYDIDDVKLDEFLDFVAEAKAVTSKEKLGVRIQNLRMYVS 302

Query: 357 FLRQARRTEVSAVKVQGNTSGSGDGSCEKDLVKNRKFHLSKQALDERFSAITSRIKKLPG 416
           F++ A+R E   +K+                 K R     KQ  D+ +            
Sbjct: 303 FIQDAKRQEGEILKIVLTELHQ----------KYRILSSKKQRQDKDYCG---------- 342

Query: 417 INKHIHFXXXXXXXXXXXXXXXXAVDNSESKTGSAAIDNKDVDKRVSSCPYPSKTEEMER 476
             KH  F                +  + E+ +    ++N       SSCPY S  EE+++
Sbjct: 343 --KHTRF---------------NSPSSEENDSADYEVENVKRSDHFSSCPYSSAEEEVKQ 385

Query: 477 LGLKSETSKKPPLDSSKVKESSKKGYTREKRKSEENGSPT------SSCKRPKKKQKVQM 530
           LG                  SS K    E R  E++ SP       S  +R   KQK+  
Sbjct: 386 LG------------------SSSKKRKAESRNHEKSDSPKLLRRGPSKLRRGHVKQKIPK 427

Query: 531 QKHELSPNCF--------LSIGKLEKFITTWKEACREHPVQQVLELLANYY---AETPXX 579
              +     F        LS G L+ FI+TWKE C+E  +   ++ L ++Y         
Sbjct: 428 SADDSDAQIFSVNDADFTLSEGALKLFISTWKETCKELSISVFVKKLLSFYNLGGSEVHG 487

Query: 580 XXXXXXXXXXYPGIGFLNVAVRAMGCGLLDSLYDAINVFN---------ENKSSSNIPDT 630
                     +P +G L+VA   +   L + +   I + N           +S +N+P+ 
Sbjct: 488 QIKIATAVSSFPFVGLLHVAKELVTEALEEQIPTEITITNLVAGYNDCTGTRSRANMPNP 547

Query: 631 T 631
           T
Sbjct: 548 T 548



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.314    0.132    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,958,689
Number of extensions: 416893
Number of successful extensions: 1514
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1508
Number of HSP's successfully gapped: 3
Length of query: 642
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 537
Effective length of database: 8,227,889
Effective search space: 4418376393
Effective search space used: 4418376393
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 115 (48.9 bits)