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Os03g0801900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF569 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.75 (0.0299) R2 : 0.645
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.73 (0.0718) R2dC : 0.463 R2C : 0.481
β3 : -1.37 (0.113) R2dE : 0.137 R2E : 0.176
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.187 (0.0651) R2dN8 : 0.00967 R2N8 : 0.0223
σ : 0.556
deviance : 142.6
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C
peak time of C : 22.2
E
wheather : temperature
threshold : 19.5
memory length : 2659
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
133.43 0.543 8.75 0.597 1.74 -1.08 0.0304 0.491 0.299 22.2 19.2 2024 -- --
133.85 0.539 8.74 0.676 1.73 -1.14 0.00346 -- 0.327 22.3 19.22 2016 -- --
133.43 0.538 8.75 0.597 1.74 -1.08 -- 0.489 0.299 22.2 19.21 2016 -- --
133.82 0.539 8.74 0.665 1.73 -1.17 -- -- 0.312 22.2 19.25 2017 -- --
305.93 0.815 8.73 0.787 -- -0.973 -- 0.678 0.397 -- 20.31 854 -- --
157.54 0.588 8.69 1.17 1.78 -- 0.0408 -- 0.538 22.3 -- -- -- --
157.54 0.588 8.69 1.17 1.78 -- -- -- 0.538 22.3 -- -- -- --
298.92 0.805 8.72 0.789 -- -1.15 -- -- 0.213 -- 21.3 776 -- --
142.6 0.556 8.75 -- 1.73 -1.37 -- -- 0.187 22.2 19.5 2659 -- --
350.42 0.875 8.64 1.2 -- -- -- -- 0.542 -- -- -- -- --
193.58 0.651 8.72 -- 1.79 -- -- -- 0.407 22.3 -- -- -- --
312.04 0.823 8.73 -- -- -1.39 -- -- 0.0886 -- 21.3 801 -- --
388.15 0.92 8.67 -- -- -- -- -- 0.409 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 129.82 temperature 20.0 1440 > th dose independent rect. 6 1
2 130.51 wind 1.0 14400 > th dose independent rect. 23 3
3 130.65 wind 1.0 14400 < th dose independent rect. 23 3
4 131.00 temperature 20.0 1440 < th dose independent rect. 22 2
6 131.33 temperature 20.0 1440 < th dose independent rect. 5 2
7 131.33 radiation 20.0 1440 < th dose dependent rect. 11 2
13 131.66 temperature 20.0 1440 > th dose independent rect. 22 2
15 131.91 wind 1.0 1440 < th dose dependent rect. 6 1
22 132.10 temperature 20.0 1440 > th dose independent rect. 21 4
28 132.26 wind 1.0 1440 < th dose independent rect. 6 1
29 132.34 temperature 20.0 1440 < th dose dependent rect. 3 1
52 132.98 precipitation 0.1 270 > th dose independent rect. 2 2
60 133.11 temperature 20.0 1440 < th dose independent rect. 22 11
62 133.11 precipitation 0.1 270 > th dose dependent rect. 2 2
63 133.15 wind 1.0 1440 > th dose independent rect. 6 1
69 133.27 radiation 10.0 1440 < th dose dependent rect. 9 6
71 133.36 radiation 10.0 1440 > th dose independent rect. 11 2
72 133.40 temperature 20.0 1440 > th dose independent rect. 21 12
88 133.58 humidity 80.0 14400 > th dose dependent rect. 4 3
115 133.88 radiation 20.0 1440 < th dose independent rect. 11 2
127 134.03 wind 7.0 43200 > th dose dependent rect. 16 1
132 134.08 wind 1.0 14400 < th dose dependent rect. 23 3
135 134.12 wind 7.0 43200 > th dose independent rect. 17 2
137 134.14 temperature 20.0 1440 < th dose independent sin 10 NA
146 134.23 radiation 1.0 1440 > th dose independent rect. 9 4
150 134.23 atmosphere 995.0 43200 < th dose independent rect. 21 18
157 134.26 wind 7.0 43200 < th dose independent rect. 17 2
159 134.26 wind 1.0 14400 < th dose dependent rect. 23 5
166 134.31 humidity 60.0 14400 > th dose dependent rect. 5 2
167 134.31 atmosphere 995.0 43200 < th dose dependent rect. 12 21
169 134.33 temperature 20.0 1440 > th dose independent sin 10 NA
172 134.34 atmosphere 995.0 43200 < th dose dependent rect. 11 17
183 134.40 atmosphere 995.0 43200 < th dose dependent rect. 12 14
224 134.65 atmosphere 995.0 43200 > th dose independent rect. 22 17
230 134.68 radiation 10.0 1440 < th dose independent rect. 12 6
233 134.68 wind 7.0 43200 > th dose dependent rect. 16 3
255 134.81 radiation 10.0 1440 < th dose independent rect. 12 8
261 134.82 atmosphere 995.0 43200 > th dose independent sin 6 NA
270 134.83 radiation 10.0 1440 < th dose independent rect. 12 16
287 134.90 wind 5.0 43200 < th dose dependent rect. 22 1
302 134.98 atmosphere 995.0 43200 < th dose independent sin 6 NA
303 134.98 wind 7.0 43200 > th dose independent rect. 16 4
306 135.00 temperature 20.0 1440 > th dose independent rect. 1 2
312 135.02 wind 1.0 14400 < th dose dependent rect. 20 8
317 135.04 radiation 10.0 1440 < th dose dependent rect. 9 9
331 135.10 radiation 10.0 1440 < th dose dependent rect. 9 11
336 135.11 atmosphere 995.0 43200 < th dose dependent sin 17 NA
346 135.13 radiation 10.0 1440 < th dose dependent rect. 9 19
380 135.25 wind 3.0 43200 < th dose independent rect. 18 6
389 135.27 wind 3.0 43200 > th dose independent rect. 18 6
426 135.40 wind 1.0 43200 > th dose independent rect. 5 21
439 135.46 wind 1.0 43200 < th dose dependent rect. 12 2
467 135.55 temperature 20.0 4320 < th dose independent rect. 17 2
477 135.59 temperature 20.0 4320 > th dose independent rect. 17 1
497 135.69 precipitation 0.1 270 > th dose independent rect. 17 12
537 135.79 wind 1.0 43200 < th dose independent rect. 5 21
548 135.83 wind 3.0 43200 < th dose dependent rect. 5 19
577 135.92 radiation 1.0 1440 < th dose independent rect. 11 1
585 135.92 radiation 1.0 1440 < th dose dependent rect. 11 1
599 135.97 humidity 80.0 14400 > th dose dependent rect. 23 9
603 135.98 radiation 1.0 1440 < th dose independent rect. 9 3
616 136.01 wind 1.0 43200 > th dose dependent rect. 22 1
636 136.06 humidity 50.0 14400 > th dose dependent rect. 23 9
692 136.13 humidity 90.0 14400 > th dose independent rect. 5 2
732 136.20 wind 1.0 43200 < th dose independent rect. 12 2
733 136.20 precipitation 0.1 270 > th dose independent rect. 13 16
742 136.21 humidity 70.0 43200 > th dose dependent rect. 19 6
812 136.30 wind 3.0 43200 < th dose independent rect. 7 17
817 136.30 humidity 70.0 14400 < th dose dependent rect. 21 1
827 136.31 humidity 90.0 14400 < th dose independent rect. 6 1
830 136.31 wind 1.0 43200 > th dose independent rect. 5 10
863 136.37 wind 1.0 43200 > th dose independent rect. 12 2
870 136.38 radiation 10.0 1440 < th dose independent sin 17 NA
876 136.38 wind 3.0 43200 > th dose independent rect. 7 17
880 136.38 humidity 90.0 14400 > th dose dependent rect. 4 11
890 136.41 radiation 10.0 4320 < th dose dependent rect. 22 7
905 136.43 humidity 70.0 43200 > th dose dependent rect. 23 1
910 136.44 atmosphere 995.0 43200 < th dose dependent sin 8 NA
938 136.48 wind 3.0 43200 < th dose dependent rect. 13 13
945 136.50 atmosphere 995.0 43200 > th dose independent rect. 2 9
951 136.50 atmosphere 995.0 43200 < th dose dependent rect. 21 13
960 136.52 atmosphere 995.0 43200 < th dose independent rect. 2 9
971 136.54 atmosphere 995.0 43200 < th dose independent rect. 5 3
982 136.55 atmosphere 995.0 43200 < th dose independent rect. 4 5
983 136.55 atmosphere 995.0 43200 < th dose independent rect. 3 7
988 136.55 atmosphere 995.0 43200 < th dose dependent rect. 2 7