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Os03g0801600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Vacuolor-sorting protein-like protein (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12 (0.0117) R2 : 0.555
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.587 (0.0286) R2dC : 0.412 R2C : 0.365
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.303 (0.0246) R2dN8 : 0.19 R2N8 : 0.144
σ : 0.221
deviance : 22.3
__
_____
C
peak time of C : 21.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
11.77 0.161 12 0.269 0.552 0.241 0.351 -0.759 0.27 21.7 19.7 789 -- --
12.72 0.166 12 0.375 0.57 0.426 0.204 -- 0.301 21.5 19 1115 -- --
12.15 0.162 12 0.279 0.547 0.271 -- -0.613 0.276 21.7 19.6 656 -- --
12.64 0.166 12 0.304 0.578 0.417 -- -- 0.26 21.8 19.1 2030 -- --
29.16 0.251 12 0.276 -- 0.461 -- -0.345 0.295 -- 19.5 723 -- --
15.76 0.186 11.9 0.501 0.586 -- 0.131 -- 0.358 21.7 -- -- -- --
15.83 0.186 11.9 0.496 0.586 -- -- -- 0.358 21.7 -- -- -- --
29.26 0.252 12 0.297 -- 0.602 -- -- 0.273 -- 19 720 -- --
14.39 0.177 12 -- 0.643 0.462 -- -- 0.211 21.8 17.58 21973 -- --
36.21 0.281 11.9 0.501 -- -- -- -- 0.357 -- -- -- -- --
22.3 0.221 12 -- 0.587 -- -- -- 0.303 21.8 -- -- -- --
30.83 0.259 12 -- -- 0.84 -- -- 0.225 -- 18.6 694 -- --
42.83 0.305 11.9 -- -- -- -- -- 0.302 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 11.42 atmosphere 995 43200 < th dose independent rect. 12 10
2 11.42 atmosphere 995 43200 < th dose dependent rect. 12 14
3 11.43 atmosphere 995 43200 > th dose independent rect. 11 11
6 11.45 temperature 20 720 > th dose independent rect. 18 19
7 11.46 atmosphere 995 43200 > th dose independent sin 20 NA
8 11.46 atmosphere 995 43200 < th dose independent rect. 11 12
9 11.47 atmosphere 995 43200 > th dose independent rect. 10 13
10 11.47 atmosphere 995 43200 < th dose dependent sin 17 NA
11 11.48 atmosphere 995 43200 < th dose independent sin 20 NA
18 11.51 atmosphere 995 43200 < th dose dependent rect. 13 11
21 11.52 atmosphere 995 43200 > th dose independent rect. 24 15
24 11.53 temperature 20 720 < th dose independent rect. 20 18
40 11.55 atmosphere 995 43200 < th dose dependent rect. 14 8
53 11.58 atmosphere 995 43200 > th dose independent rect. 13 3
54 11.58 atmosphere 995 43200 > th dose independent rect. 4 15
62 11.59 atmosphere 995 43200 > th dose independent sin 4 NA
63 11.59 atmosphere 995 43200 < th dose independent sin 4 NA
64 11.59 atmosphere 995 43200 < th dose independent rect. 13 4
65 11.59 atmosphere 995 43200 < th dose independent rect. 1 15
73 11.60 atmosphere 995 43200 > th dose independent rect. 14 1
77 11.60 atmosphere 995 43200 < th dose independent rect. 12 6
95 11.60 humidity 90 14400 > th dose dependent rect. 5 2
96 11.61 radiation 1 1440 < th dose independent rect. 10 2
111 11.61 atmosphere 995 43200 < th dose independent rect. 18 21
112 11.61 radiation 1 1440 < th dose dependent rect. 10 2
120 11.62 atmosphere 995 43200 < th dose independent rect. 3 16
132 11.63 atmosphere 995 43200 < th dose independent rect. 14 1
169 11.65 temperature 20 720 > th dose independent sin 8 NA
194 11.66 temperature 20 720 < th dose independent sin 9 NA
221 11.67 atmosphere 995 43200 < th dose dependent rect. 15 1
222 11.67 atmosphere 995 43200 < th dose dependent rect. 14 5
228 11.68 wind 9 43200 < th dose independent rect. 20 4
236 11.68 temperature 20 1440 < th dose dependent rect. 3 2
240 11.68 atmosphere 995 43200 < th dose dependent rect. 11 21
242 11.69 wind 9 43200 > th dose independent rect. 20 4
313 11.73 temperature 20 1440 > th dose independent rect. 6 1
321 11.73 atmosphere 1000 43200 < th dose dependent rect. 12 1
325 11.74 temperature 20 1440 < th dose independent rect. 5 2
326 11.74 radiation 1 1440 > th dose independent rect. 9 4
361 11.75 atmosphere 1000 43200 < th dose dependent rect. 9 6
393 11.77 humidity 90 14400 > th dose dependent rect. 4 5
437 11.80 radiation 30 4320 < th dose independent rect. 2 6
447 11.81 radiation 30 4320 < th dose independent rect. 6 2
458 11.81 radiation 30 4320 < th dose independent rect. 19 13
485 11.82 wind 7 43200 > th dose dependent rect. 20 4
532 11.85 temperature 20 720 > th dose independent rect. 8 23
538 11.86 temperature 20 720 > th dose independent no NA NA
546 11.86 temperature 20 720 > th dose independent rect. 12 23
552 11.86 temperature 20 720 < th dose dependent rect. 21 8
572 11.88 temperature 20 720 < th dose independent no NA NA
591 11.89 temperature 20 720 < th dose independent rect. 8 23
592 11.89 temperature 20 720 < th dose independent rect. 11 23
594 11.89 temperature 20 720 < th dose dependent sin 11 NA
600 11.89 humidity 90 14400 > th dose dependent rect. 3 10
623 11.91 temperature 20 720 > th dose independent rect. 1 23
705 11.95 temperature 20 720 > th dose independent rect. 5 23
737 11.96 radiation 1 1440 < th dose dependent rect. 9 7
761 11.97 radiation 20 4320 > th dose dependent rect. 6 2
785 11.98 radiation 20 4320 > th dose independent rect. 6 2
822 11.99 wind 5 43200 > th dose independent rect. 8 2
838 11.99 temperature 20 720 < th dose independent rect. 5 23
856 12.00 wind 5 43200 < th dose independent rect. 8 2
857 12.00 temperature 20 1440 < th dose independent rect. 22 2
876 12.01 temperature 20 1440 > th dose independent rect. 22 2
884 12.01 temperature 20 720 < th dose independent rect. 3 23
918 12.02 humidity 90 14400 > th dose dependent sin 4 NA