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Os03g0800800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : SMAD/FHA domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.017) R2 : 0.859
β1 : 1.85 (0.0622) R2dD : 0.282 R2D : 0.175
β2 : 1.14 (0.0551) R2dC : 0.216 R2C : 0.4
β3 : -0.978 (0.0553) R2dE : 0.159 R2E : 0.329
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.604 (0.0365) R2dN8 : 0.116 R2N8 : -0.00262
σ : 0.317
deviance : 46.42
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_____
C
peak time of C : 16.1
E
wheather : wind
threshold : 4.5
memory length : 275
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 2.78
open length of G : 2.6

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
46.18 0.319 10.9 1.82 1.15 -0.969 -0.161 -0.426 0.597 16.1 4.299 273 2.93 2.48
46.54 0.318 10.9 1.85 1.14 -0.99 -0.0523 -- 0.6 16 4.603 270 2.89 2.53
46.21 0.317 10.9 1.82 1.14 -0.977 -- -0.331 0.598 16.1 4.5 271 2.88 2.54
46.42 0.317 10.9 1.85 1.14 -0.978 -- -- 0.604 16.1 4.5 275 2.78 2.6
84.86 0.429 10.9 1.84 -- -1.58 -- -0.2 0.555 -- 5.536 304 2.57 2.13
71 0.395 10.9 1.79 1.81 -- 0.347 -- 0.53 16.8 -- -- -- --
71.31 0.395 10.9 1.79 1.81 -- -- -- 0.532 16.8 -- -- -- --
83.55 0.426 10.9 2.11 -- -1.49 -- -- 0.683 -- 5.406 376 1.57 2.5
135.67 0.542 10.9 -- 1.11 -0.933 -- -- 0.423 16 5.2 273 2.82 2.75
244.08 0.73 10.9 1.72 -- -- -- -- 0.485 -- -- -- -- --
155.76 0.584 10.9 -- 1.77 -- -- -- 0.332 16.8 -- -- -- --
163.83 0.596 10.9 -- -- -1.54 -- -- 0.41 -- 7.5 375 0.569 3.89
322.32 0.838 10.9 -- -- -- -- -- 0.294 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 46.87 wind 5.0 270 < th dose independent rect. 3 2
2 47.21 wind 5.0 270 < th dose independent rect. 2 4
3 47.35 precipitation 0.1 270 < th dose independent rect. 3 2
4 47.35 precipitation 0.1 270 < th dose dependent rect. 3 2
5 47.54 wind 9.0 270 < th dose independent rect. 5 22
7 48.01 precipitation 0.1 270 < th dose independent rect. 2 4
8 48.01 precipitation 0.1 270 < th dose dependent rect. 2 4
10 48.06 radiation 1.0 270 < th dose dependent rect. 3 2
11 48.17 wind 7.0 270 < th dose independent rect. 6 20
14 48.23 temperature 10.0 270 > th dose independent rect. 3 2
16 48.23 temperature 30.0 270 < th dose independent rect. 3 2
17 48.23 humidity 50.0 270 > th dose independent rect. 3 2
20 48.23 atmosphere 995.0 270 > th dose independent rect. 3 2
21 48.23 atmosphere 1010.0 270 < th dose independent rect. 3 2
23 48.23 radiation 20.0 270 < th dose independent rect. 3 2
26 48.23 temperature 10.0 270 > th dose independent rect. 5 22
27 48.25 radiation 30.0 270 < th dose dependent rect. 3 2
32 48.32 radiation 1.0 270 < th dose independent rect. 3 2
34 48.47 wind 1.0 270 > th dose independent rect. 3 2
38 48.60 atmosphere 1010.0 270 < th dose independent rect. 2 4
40 48.72 temperature 10.0 270 > th dose independent rect. 2 4
42 48.72 temperature 30.0 270 < th dose independent rect. 2 4
43 48.72 humidity 50.0 270 > th dose independent rect. 2 4
46 48.72 atmosphere 995.0 270 > th dose independent rect. 2 4
48 48.72 radiation 20.0 270 < th dose independent rect. 2 4
51 48.72 temperature 10.0 270 > th dose independent rect. 6 20
53 48.77 temperature 30.0 270 < th dose dependent rect. 3 2
54 48.84 radiation 40.0 270 < th dose dependent rect. 2 4
56 48.90 wind 1.0 270 > th dose independent rect. 2 4
63 49.17 wind 9.0 90 < th dose independent rect. 8 19
79 49.36 wind 5.0 270 < th dose independent rect. 1 6
83 49.42 precipitation 0.1 270 < th dose independent rect. 6 20
85 49.42 precipitation 0.1 270 < th dose dependent rect. 6 20
86 49.43 wind 9.0 270 < th dose dependent rect. 3 2
96 49.57 temperature 10.0 90 > th dose independent rect. 8 19
103 49.70 atmosphere 995.0 270 > th dose independent rect. 6 20
104 49.71 precipitation 0.1 90 < th dose independent rect. 8 19
105 49.71 precipitation 0.1 90 < th dose dependent rect. 8 19
109 49.80 wind 9.0 270 < th dose dependent rect. 2 4
114 50.00 atmosphere 995.0 90 > th dose independent rect. 8 19
117 50.04 precipitation 0.1 270 < th dose independent rect. 5 22
118 50.04 precipitation 0.1 270 < th dose dependent rect. 5 22
124 50.19 precipitation 0.1 270 < th dose independent rect. 1 6
125 50.19 precipitation 0.1 270 < th dose dependent rect. 1 6
145 50.51 wind 1.0 270 > th dose independent rect. 1 6
162 50.77 humidity 70.0 270 > th dose independent rect. 1 6
163 50.77 radiation 1.0 270 < th dose dependent rect. 3 8
168 50.80 temperature 10.0 270 > th dose independent rect. 1 6
170 50.80 temperature 30.0 270 < th dose independent rect. 1 6
171 50.80 humidity 50.0 270 > th dose independent rect. 1 6
173 50.80 atmosphere 995.0 270 > th dose independent rect. 1 6
239 50.99 humidity 50.0 270 > th dose dependent rect. 3 2
274 51.30 atmosphere 995.0 270 > th dose dependent rect. 3 2
308 51.60 radiation 1.0 270 < th dose independent rect. 2 9
318 51.68 radiation 1.0 270 < th dose dependent rect. 3 14
319 51.69 wind 9.0 10 < th dose independent rect. 8 20
337 51.80 atmosphere 995.0 90 > th dose dependent rect. 3 5
349 51.86 radiation 1.0 270 < th dose dependent rect. 2 16
362 51.92 precipitation 0.1 10 < th dose independent rect. 3 6
365 51.92 precipitation 0.1 10 < th dose dependent rect. 3 6
372 51.96 humidity 50.0 270 > th dose dependent rect. 2 4
376 51.98 temperature 10.0 270 > th dose dependent rect. 3 2
380 52.01 wind 9.0 270 < th dose dependent rect. 6 20
401 52.09 wind 9.0 90 < th dose dependent rect. 8 19
497 52.52 wind 9.0 270 < th dose independent rect. 21 14
501 52.55 radiation 40.0 270 < th dose dependent rect. 15 15
509 52.62 temperature 10.0 270 > th dose independent rect. 11 10
510 52.62 temperature 10.0 270 > th dose independent rect. 21 14
511 52.62 atmosphere 995.0 270 > th dose independent rect. 21 14
515 52.65 atmosphere 1015.0 270 < th dose dependent rect. 3 2
534 52.70 atmosphere 1015.0 270 < th dose independent rect. 11 10
548 52.83 humidity 50.0 270 > th dose independent rect. 21 14
613 53.02 wind 9.0 270 < th dose independent rect. 6 9
614 53.02 atmosphere 995.0 270 > th dose independent rect. 6 9
659 53.12 wind 7.0 270 < th dose independent rect. 6 7
671 53.16 wind 9.0 1440 < th dose independent rect. 4 5
672 53.16 temperature 10.0 1440 > th dose independent rect. 4 5
675 53.16 humidity 50.0 1440 > th dose independent rect. 4 5
677 53.16 atmosphere 995.0 1440 > th dose independent rect. 4 5
678 53.16 atmosphere 1015.0 1440 < th dose independent rect. 4 5
679 53.16 precipitation 0.1 270 < th dose independent rect. 6 9
680 53.16 precipitation 0.1 270 < th dose independent rect. 15 15
681 53.16 temperature 10.0 1440 > th dose independent rect. 9 19
685 53.16 precipitation 0.1 270 < th dose dependent rect. 6 9
686 53.16 precipitation 0.1 270 < th dose dependent rect. 15 15
687 53.17 temperature 15.0 270 > th dose independent rect. 6 7
698 53.21 atmosphere 1015.0 90 < th dose independent rect. 8 19
701 53.22 wind 7.0 270 < th dose independent rect. 17 9
708 53.24 wind 1.0 270 > th dose independent rect. 11 10
710 53.24 radiation 30.0 270 < th dose independent rect. 15 15
711 53.25 precipitation 0.1 270 < th dose independent rect. 2 15
712 53.25 precipitation 0.1 270 < th dose dependent rect. 2 15
720 53.29 temperature 10.0 270 > th dose independent rect. 6 9
721 53.29 atmosphere 1015.0 270 < th dose independent rect. 6 9
722 53.29 temperature 10.0 270 > th dose independent rect. 15 15
771 53.44 precipitation 0.1 270 < th dose independent rect. 11 10
775 53.44 precipitation 0.1 270 < th dose dependent rect. 11 10
782 53.47 atmosphere 995.0 270 > th dose independent rect. 17 9
793 53.54 humidity 50.0 270 > th dose independent rect. 14 16
795 53.55 atmosphere 995.0 270 > th dose independent rect. 6 7
796 53.55 atmosphere 1015.0 270 < th dose independent rect. 6 7
797 53.55 temperature 10.0 270 > th dose independent rect. 13 17
812 53.62 radiation 40.0 270 < th dose independent rect. 13 17
819 53.67 wind 1.0 270 > th dose independent rect. 13 17
830 53.73 temperature 10.0 270 > th dose independent rect. 17 9
831 53.73 radiation 20.0 270 < th dose independent rect. 17 9
835 53.73 temperature 10.0 270 > th dose independent rect. 2 15
836 53.73 atmosphere 1015.0 270 < th dose independent rect. 2 15
871 53.84 wind 9.0 270 < th dose dependent rect. 7 4
878 53.89 wind 9.0 270 < th dose independent rect. 15 15
887 53.91 atmosphere 1015.0 270 < th dose independent rect. 6 20
889 53.91 temperature 10.0 90 > th dose dependent rect. 8 19
893 53.93 wind 9.0 270 < th dose dependent rect. 6 7
896 53.95 precipitation 0.1 270 < th dose independent rect. 21 14
901 53.95 precipitation 0.1 270 < th dose dependent rect. 21 14
903 53.96 humidity 50.0 270 > th dose independent rect. 18 8
912 53.97 radiation 20.0 270 < th dose dependent rect. 18 8
923 54.00 precipitation 0.1 270 < th dose independent rect. 17 9
926 54.00 precipitation 0.1 270 < th dose dependent rect. 17 9
927 54.01 humidity 50.0 270 > th dose dependent rect. 19 7
931 54.02 humidity 50.0 270 > th dose independent rect. 6 7
940 54.07 atmosphere 995.0 90 > th dose dependent rect. 8 19
953 54.14 wind 9.0 270 < th dose independent rect. 11 10
969 54.25 atmosphere 1015.0 270 < th dose dependent rect. 2 4
975 54.28 radiation 1.0 270 > th dose independent rect. 6 7
999 54.37 radiation 1.0 270 > th dose independent sin 3 NA