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Os03g0800500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Putative small multi-drug export family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.0233) R2 : 0.363
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.42 (0.16) R2dC : 2.62 R2C : -1.61
β3 : -1.8 (0.139) R2dE : 1.96 R2E : -2.29
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.229 (0.0492) R2dN8 : 0.037 R2N8 : -0.000856
σ : 0.434
deviance : 86.72
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_____
C
peak time of C : 1.69
E
wheather : radiation
threshold : 0.04
memory length : 136
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 5.63
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
82.15 0.426 10.3 -0.403 2.42 -1.81 -0.752 0.223 -0.281 1.67 0.04003 119 5.4 --
82.05 0.422 10.3 -0.397 2.45 -1.84 -0.483 -- -0.296 1.67 0.04024 124 5.46 --
82.7 0.424 10.3 -0.449 2.41 -1.83 -- -0.182 -0.243 1.65 5.044e-06 138 5.89 --
82.94 0.424 10.3 -0.375 2.42 -1.81 -- -- -0.237 1.69 0.04 136 5.66 --
127.82 0.529 10.2 -0.308 -- 0.245 -- -0.386 -0.149 -- 16.76 2839 5.18 --
113 0.498 10.2 -0.329 0.576 -- -0.765 -- -0.166 3.66 -- -- -- --
114.77 0.502 10.2 -0.317 0.571 -- -- -- -0.162 3.64 -- -- -- --
115.12 0.5 10.3 -0.417 -- -0.916 -- -- -0.337 -- 104.8 1337 1.36 --
86.72 0.434 10.3 -- 2.42 -1.8 -- -- -0.229 1.69 0.04 136 5.63 --
132.91 0.539 10.2 -0.293 -- -- -- -- -0.147 -- -- -- -- --
117.42 0.507 10.2 -- 0.565 -- -- -- -0.126 3.64 -- -- -- --
114.62 0.499 10.2 -- -- -0.8 -- -- -0.154 -- 325.3 1388 1.61 --
135.18 0.543 10.2 -- -- -- -- -- -0.114 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 69.48 temperature 10.0 270 > th dose dependent rect. 19 8
2 70.03 humidity 90.0 270 < th dose independent rect. 8 6
5 71.83 temperature 15.0 270 > th dose independent rect. 7 8
7 72.52 radiation 1.0 270 > th dose independent rect. 7 8
9 72.58 temperature 15.0 270 > th dose independent rect. 8 6
13 73.22 temperature 10.0 270 > th dose dependent rect. 20 17
17 74.16 temperature 15.0 270 > th dose independent rect. 8 18
22 74.77 wind 9.0 270 < th dose independent rect. 15 16
26 75.27 precipitation 0.1 270 < th dose independent rect. 15 16
27 75.27 precipitation 0.1 270 < th dose dependent rect. 15 16
28 75.42 wind 9.0 270 < th dose independent rect. 3 16
29 75.45 precipitation 0.1 270 < th dose independent rect. 7 8
30 75.45 precipitation 0.1 270 < th dose dependent rect. 7 8
32 75.62 atmosphere 995.0 270 > th dose independent rect. 7 8
33 75.65 wind 9.0 270 < th dose independent rect. 14 18
34 75.69 temperature 15.0 270 > th dose independent rect. 7 20
35 75.72 humidity 60.0 270 > th dose independent rect. 19 8
36 75.75 temperature 10.0 270 > th dose independent rect. 19 8
37 75.75 temperature 30.0 270 < th dose independent rect. 19 8
39 75.75 atmosphere 995.0 270 > th dose independent rect. 19 8
40 75.75 radiation 1.0 270 < th dose independent rect. 19 8
45 75.75 temperature 10.0 270 > th dose independent rect. 3 16
46 75.75 atmosphere 1015.0 270 < th dose independent rect. 3 16
47 75.75 precipitation 0.1 270 < th dose independent rect. 3 16
48 75.75 radiation 1.0 270 < th dose dependent rect. 19 8
53 75.75 precipitation 0.1 270 < th dose dependent rect. 3 16
54 75.76 humidity 50.0 270 > th dose dependent rect. 2 7
57 75.85 radiation 40.0 270 < th dose dependent rect. 3 5
58 75.91 wind 7.0 270 < th dose independent rect. 2 6
59 75.92 wind 9.0 270 < th dose independent rect. 19 8
60 75.94 precipitation 0.1 270 < th dose independent rect. 2 6
61 75.94 wind 9.0 270 < th dose independent rect. 7 8
62 75.94 precipitation 0.1 270 < th dose dependent rect. 2 6
64 75.99 radiation 40.0 270 < th dose independent rect. 15 16
66 76.00 atmosphere 1015.0 270 < th dose independent rect. 7 8
67 76.00 temperature 10.0 270 > th dose independent rect. 15 16
71 76.05 radiation 40.0 270 < th dose dependent rect. 2 7
72 76.08 radiation 30.0 270 < th dose independent rect. 2 6
74 76.11 temperature 15.0 270 > th dose independent rect. 21 16
77 76.21 atmosphere 995.0 270 > th dose independent rect. 8 18
78 76.28 humidity 70.0 270 > th dose independent rect. 2 7
81 76.31 temperature 10.0 270 > th dose independent rect. 2 6
83 76.31 temperature 30.0 270 < th dose independent rect. 2 6
84 76.31 humidity 50.0 270 > th dose independent rect. 2 6
86 76.31 atmosphere 995.0 270 > th dose independent rect. 2 6
87 76.31 atmosphere 1015.0 270 < th dose independent rect. 2 6
90 76.35 precipitation 0.1 270 < th dose independent rect. 14 18
91 76.35 precipitation 0.1 270 < th dose dependent rect. 14 18
94 76.44 precipitation 0.1 270 < th dose independent rect. 8 6
95 76.44 precipitation 0.1 270 < th dose dependent rect. 8 6
97 76.47 wind 9.0 270 < th dose independent rect. 8 6
108 76.64 precipitation 0.1 270 < th dose independent rect. 19 8
109 76.64 precipitation 0.1 270 < th dose dependent rect. 19 8
113 76.80 precipitation 0.1 270 < th dose independent rect. 3 4
115 76.80 atmosphere 995.0 270 > th dose independent rect. 8 6
116 76.80 atmosphere 1015.0 270 < th dose independent rect. 8 6
118 76.80 temperature 10.0 270 > th dose independent rect. 14 18
119 76.80 precipitation 0.1 270 < th dose dependent rect. 3 4
124 76.99 wind 7.0 270 < th dose independent rect. 3 4
139 77.07 precipitation 0.1 270 < th dose independent rect. 8 18
140 77.07 precipitation 0.1 270 < th dose dependent rect. 8 18
162 77.25 temperature 10.0 270 > th dose independent rect. 3 4
164 77.25 temperature 30.0 270 < th dose independent rect. 3 4
165 77.25 humidity 50.0 270 > th dose independent rect. 3 4
167 77.25 atmosphere 995.0 270 > th dose independent rect. 3 4
168 77.25 atmosphere 1015.0 270 < th dose independent rect. 3 4
206 77.65 wind 9.0 270 < th dose independent rect. 8 18
218 77.83 wind 1.0 270 > th dose independent rect. 14 17
222 77.91 wind 1.0 270 > th dose independent rect. 2 6
223 77.92 humidity 50.0 270 > th dose independent rect. 7 8
227 78.02 precipitation 0.1 270 < th dose independent rect. 7 20
228 78.02 precipitation 0.1 270 < th dose dependent rect. 7 20
236 78.20 humidity 50.0 270 > th dose independent rect. 8 6
258 78.36 wind 1.0 270 > th dose independent rect. 3 16
260 78.37 temperature 10.0 270 > th dose dependent rect. 8 5
288 78.82 humidity 50.0 270 > th dose dependent rect. 19 8
290 78.83 wind 9.0 270 < th dose independent rect. 13 8
291 78.84 wind 9.0 270 < th dose dependent rect. 3 4
315 79.07 temperature 20.0 270 > th dose independent rect. 20 6
325 79.29 wind 1.0 270 > th dose independent rect. 3 4
350 79.59 atmosphere 1015.0 270 < th dose independent rect. 8 18
358 79.68 wind 9.0 270 < th dose independent rect. 21 16
360 79.69 atmosphere 1015.0 270 < th dose independent rect. 19 8
361 79.70 precipitation 0.1 270 < th dose independent rect. 13 8
362 79.70 precipitation 0.1 270 < th dose dependent rect. 13 8
363 79.72 wind 1.0 270 > th dose independent rect. 8 6
365 79.72 wind 1.0 270 > th dose independent rect. 13 8
389 79.94 temperature 10.0 90 > th dose dependent rect. 9 18
397 80.04 temperature 10.0 270 > th dose independent rect. 13 8
399 80.04 atmosphere 995.0 270 > th dose independent rect. 21 16
442 80.31 humidity 50.0 270 > th dose independent rect. 8 18
450 80.38 precipitation 0.1 270 < th dose independent rect. 21 16
451 80.38 precipitation 0.1 270 < th dose dependent rect. 21 16
464 80.53 atmosphere 995.0 270 > th dose independent rect. 15 16
474 80.68 humidity 90.0 10 < th dose independent rect. 9 7
484 80.74 temperature 10.0 270 > th dose dependent rect. 3 4
518 80.94 temperature 10.0 270 > th dose dependent rect. 9 3
572 81.29 atmosphere 995.0 270 > th dose independent rect. 14 18
582 81.33 atmosphere 1015.0 270 < th dose independent rect. 7 20
594 81.42 atmosphere 1015.0 270 < th dose independent rect. 13 8
610 81.62 atmosphere 995.0 270 > th dose independent rect. 3 16
639 81.75 temperature 10.0 10 > th dose dependent rect. 21 8
640 81.75 temperature 10.0 10 > th dose dependent rect. 22 17
645 81.80 atmosphere 1015.0 270 < th dose independent rect. 21 16
651 81.84 humidity 50.0 270 > th dose independent rect. 21 16
662 81.95 wind 7.0 10 < th dose independent rect. 16 17
668 81.97 humidity 90.0 270 < th dose dependent rect. 8 5
738 82.34 radiation 1.0 270 < th dose independent rect. 3 8
746 82.36 wind 9.0 270 < th dose dependent rect. 8 6
757 82.47 atmosphere 995.0 10 > th dose independent rect. 9 7
781 82.60 humidity 50.0 270 > th dose independent rect. 14 18
820 82.75 temperature 10.0 10 > th dose dependent rect. 9 7
823 82.76 wind 9.0 10 < th dose independent rect. 9 7
836 82.80 temperature 10.0 10 > th dose dependent rect. 9 20
865 82.89 wind 9.0 270 < th dose dependent rect. 19 8
908 83.00 precipitation 0.1 10 < th dose independent rect. 16 17
911 83.00 precipitation 0.1 10 < th dose dependent rect. 16 17
950 83.13 temperature 10.0 10 > th dose independent rect. 9 7
952 83.13 atmosphere 1015.0 10 < th dose independent rect. 9 7
953 83.13 precipitation 0.1 10 < th dose independent rect. 9 7
955 83.13 temperature 10.0 10 > th dose independent rect. 16 17
958 83.13 precipitation 0.1 10 < th dose dependent rect. 9 7