Os03g0797700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0797700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.63 | 0.213 | 10.9 | -0.297 | 0.661 | -0.517 | 0.142 | 0.149 | 0.00688 | 2.23 | 80.4 | 916 | -- | -- |
| 20.66 | 0.212 | 10.9 | -0.302 | 0.66 | -0.507 | 0.172 | -- | 0.00484 | 2.27 | 79.39 | 923 | -- | -- |
| 20.7 | 0.212 | 10.9 | -0.294 | 0.657 | -0.521 | -- | 0.227 | 0.00347 | 2.24 | 79 | 907 | -- | -- |
| 20.76 | 0.212 | 10.9 | -0.307 | 0.654 | -0.501 | -- | -- | 0.00186 | 2.24 | 79.33 | 904 | -- | -- |
| 28.15 | 0.247 | 10.9 | -0.397 | -- | -0.773 | -- | 0.0216 | 0.0218 | -- | 91.09 | 141 | -- | -- |
| 25.08 | 0.235 | 10.9 | -0.377 | 0.612 | -- | 0.191 | -- | 0.028 | 3.22 | -- | -- | -- | -- |
| 25.2 | 0.235 | 10.9 | -0.381 | 0.613 | -- | -- | -- | 0.0269 | 3.22 | -- | -- | -- | -- |
| 28.11 | 0.247 | 10.9 | -0.358 | -- | -0.787 | -- | -- | 0.0441 | -- | 126.4 | 147 | -- | -- |
| 23.25 | 0.225 | 10.9 | -- | 0.672 | -0.538 | -- | -- | 0.0204 | 2.26 | 78.07 | 927 | -- | -- |
| 46.51 | 0.319 | 10.9 | -0.354 | -- | -- | -- | -- | 0.043 | -- | -- | -- | -- | -- |
| 29.01 | 0.252 | 10.9 | -- | 0.605 | -- | -- | -- | 0.0693 | 3.22 | -- | -- | -- | -- |
| 31.11 | 0.26 | 10.9 | -- | -- | -0.789 | -- | -- | 0.0556 | -- | 86.58 | 200 | -- | -- |
| 49.83 | 0.329 | 10.9 | -- | -- | -- | -- | -- | 0.0823 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.82 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 3 | 20.52 | humidity | 70 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 5 | 20.56 | humidity | 70 | 720 | > th | dose independent | rect. | 9 | 20 |
| 6 | 20.58 | humidity | 70 | 720 | > th | dose independent | rect. | 24 | 21 |
| 7 | 20.59 | humidity | 70 | 720 | > th | dose independent | rect. | 9 | 12 |
| 9 | 20.62 | humidity | 70 | 1440 | > th | dose independent | rect. | 16 | 21 |
| 10 | 20.62 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 22 | 20.77 | humidity | 70 | 1440 | > th | dose independent | rect. | 16 | 18 |
| 39 | 20.83 | humidity | 70 | 1440 | < th | dose independent | rect. | 16 | 21 |
| 47 | 20.86 | humidity | 50 | 720 | > th | dose dependent | rect. | 9 | 12 |
| 50 | 20.88 | humidity | 70 | 1440 | > th | dose independent | rect. | 16 | 8 |
| 51 | 20.88 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 13 |
| 55 | 20.89 | humidity | 70 | 1440 | > th | dose independent | rect. | 16 | 5 |
| 66 | 20.89 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 20 |
| 73 | 20.90 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 74 | 20.91 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 22 |
| 79 | 20.93 | humidity | 70 | 720 | < th | dose independent | rect. | 12 | 23 |
| 108 | 21.00 | humidity | 80 | 720 | < th | dose dependent | rect. | 12 | 23 |
| 135 | 21.04 | humidity | 80 | 720 | < th | dose dependent | rect. | 12 | 10 |
| 147 | 21.07 | humidity | 70 | 1440 | > th | dose independent | sin | 11 | NA |
| 148 | 21.07 | humidity | 70 | 720 | < th | dose independent | sin | 19 | NA |
| 155 | 21.07 | humidity | 80 | 720 | < th | dose dependent | rect. | 10 | 12 |
| 193 | 21.10 | humidity | 70 | 720 | < th | dose independent | rect. | 10 | 10 |
| 244 | 21.12 | humidity | 80 | 720 | < th | dose dependent | sin | 20 | NA |
| 259 | 21.13 | humidity | 70 | 720 | > th | dose independent | sin | 19 | NA |
| 325 | 21.15 | humidity | 80 | 1440 | < th | dose dependent | sin | 1 | NA |
| 352 | 21.16 | humidity | 70 | 720 | < th | dose independent | rect. | 12 | 8 |
| 487 | 21.19 | humidity | 70 | 720 | < th | dose independent | no | NA | NA |
| 510 | 21.19 | humidity | 70 | 1440 | < th | dose independent | rect. | 16 | 18 |
| 542 | 21.19 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 598 | 21.20 | humidity | 80 | 720 | < th | dose dependent | no | NA | NA |
| 677 | 21.23 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |