Os03g0793800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor domain containing protein.
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Os03g0793800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 997.5 | 1.48 | 7.05 | -4.48 | 0.49 | -2.05 | 1.04 | 11.7 | -1.54 | 3.11 | 23.7 | 1485 | 8.55 | -- |
| 1192.63 | 1.61 | 6.68 | -2.43 | 0.536 | -3.17 | 0.415 | -- | -0.683 | 4.22 | 20.5 | 22231 | 8.62 | -- |
| 989.2 | 1.46 | 7.08 | -4.49 | 0.536 | -2.02 | -- | 11.6 | -1.59 | 2.66 | 23.4 | 1513 | 7.08 | -- |
| 1186.9 | 1.6 | 6.69 | -2.31 | 0.499 | -3.25 | -- | -- | -0.588 | 3.51 | 20.5 | 22375 | 10.9 | -- |
| 1004.84 | 1.48 | 7.06 | -4.61 | -- | -2.04 | -- | 11.5 | -1.61 | -- | 23.41 | 1480 | 7.06 | -- |
| 1333.27 | 1.71 | 6.42 | 0.728 | 0.513 | -- | 0.873 | -- | 0.569 | 2.88 | -- | -- | -- | -- |
| 1335.63 | 1.71 | 6.43 | 0.707 | 0.527 | -- | -- | -- | 0.563 | 3.35 | -- | -- | -- | -- |
| 1185.23 | 1.6 | 6.7 | -2.92 | -- | -3.68 | -- | -- | -0.597 | -- | 19.7 | 25931 | 12.6 | -- |
| 1195.87 | 1.61 | 6.51 | -- | 0.383 | -3.19 | -- | -- | 0.156 | 3.88 | 14.3 | 31792 | 13.3 | -- |
| 1351.26 | 1.72 | 6.43 | 0.73 | -- | -- | -- | -- | 0.577 | -- | -- | -- | -- | -- |
| 1348.82 | 1.72 | 6.44 | -- | 0.541 | -- | -- | -- | 0.484 | 3.35 | -- | -- | -- | -- |
| 1206.03 | 1.62 | 6.52 | -- | -- | -3.19 | -- | -- | 0.168 | -- | 14.5 | 31918 | 14 | -- |
| 1365.3 | 1.72 | 6.44 | -- | -- | -- | -- | -- | 0.496 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 884.20 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 4 |
| 2 | 884.90 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 8 | 896.23 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 10 | 896.38 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 18 | 901.52 | humidity | 90 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 33 | 914.03 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 38 | 915.93 | radiation | 40 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 41 | 918.32 | wind | 3 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 44 | 918.66 | radiation | 40 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 62 | 919.28 | radiation | 10 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 75 | 919.58 | radiation | 40 | 43200 | > th | dose independent | sin | 9 | NA |
| 99 | 920.50 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 14 |
| 123 | 921.23 | humidity | 90 | 43200 | > th | dose dependent | rect. | 19 | 7 |
| 127 | 921.40 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 130 | 921.51 | radiation | 1 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 135 | 921.89 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 169 | 923.27 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 18 |
| 173 | 923.59 | humidity | 90 | 43200 | > th | dose independent | rect. | 19 | 17 |
| 187 | 924.46 | humidity | 90 | 43200 | > th | dose dependent | sin | 8 | NA |
| 196 | 924.85 | radiation | 40 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 205 | 925.41 | humidity | 90 | 43200 | > th | dose dependent | rect. | 1 | 10 |
| 224 | 926.58 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 271 | 928.10 | radiation | 30 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 297 | 928.36 | radiation | 30 | 43200 | > th | dose dependent | rect. | 9 | 4 |
| 303 | 928.58 | radiation | 10 | 43200 | > th | dose dependent | rect. | 5 | 8 |
| 336 | 929.52 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 4 |
| 349 | 929.84 | radiation | 40 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 354 | 929.90 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 6 |
| 386 | 930.39 | humidity | 90 | 43200 | > th | dose dependent | rect. | 3 | 5 |
| 391 | 930.55 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 424 | 930.75 | radiation | 10 | 43200 | > th | dose dependent | sin | 8 | NA |
| 627 | 932.80 | humidity | 90 | 43200 | < th | dose independent | sin | 15 | NA |
| 666 | 932.92 | radiation | 40 | 43200 | > th | dose independent | no | NA | NA |
| 875 | 933.67 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 7 |
| 942 | 934.69 | radiation | 40 | 43200 | < th | dose dependent | rect. | 5 | 8 |
| 955 | 934.78 | radiation | 40 | 43200 | < th | dose dependent | rect. | 1 | 12 |
| 962 | 934.81 | radiation | 40 | 43200 | < th | dose dependent | rect. | 19 | 18 |