Os03g0786400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, C2H2-type domain containing protein.
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Os03g0786400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, C2H2-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 133.98 | 0.544 | 11.1 | -0.927 | 1.01 | -0.971 | -0.392 | -1.68 | 0.0198 | 9.18 | 997.6 | 8649 | -- | -- |
| 136.96 | 0.545 | 11.2 | -1.22 | 1.01 | -1.04 | -0.37 | -- | -0.0459 | 9.15 | 995.2 | 9943 | -- | -- |
| 134.51 | 0.54 | 11.1 | -0.945 | 1.02 | -0.974 | -- | -1.67 | 0.0175 | 9.13 | 997.7 | 8650 | -- | -- |
| 137.43 | 0.546 | 11.2 | -1.25 | 1.01 | -1.06 | -- | -- | -0.0449 | 9.09 | 994.4 | 9923 | -- | -- |
| 194.04 | 0.649 | 11.2 | -0.981 | -- | -1 | -- | -1.54 | 0.0196 | -- | 996.3 | 8656 | -- | -- |
| 159.04 | 0.591 | 11.2 | -0.982 | 1.01 | -- | -0.407 | -- | -0.0398 | 9.1 | -- | -- | -- | -- |
| 159.61 | 0.592 | 11.2 | -0.997 | 1.02 | -- | -- | -- | -0.0405 | 9.04 | -- | -- | -- | -- |
| 196.3 | 0.653 | 11.2 | -1.25 | -- | -1.07 | -- | -- | -0.0383 | -- | 992.5 | 9996 | -- | -- |
| 175.43 | 0.617 | 11.1 | -- | 1.01 | -0.695 | -- | -- | 0.0832 | 9.14 | 993.6 | 10046 | -- | -- |
| 219.14 | 0.692 | 11.2 | -0.998 | -- | -- | -- | -- | -0.0344 | -- | -- | -- | -- | -- |
| 185.78 | 0.638 | 11.1 | -- | 1.02 | -- | -- | -- | 0.0705 | 9.11 | -- | -- | -- | -- |
| 234.65 | 0.713 | 11.2 | -- | -- | -0.709 | -- | -- | 0.0921 | -- | 986.1 | 10068 | -- | -- |
| 245.43 | 0.731 | 11.2 | -- | -- | -- | -- | -- | 0.0763 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 133.47 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 3 | 134.47 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 7 | 135.01 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 8 |
| 8 | 135.03 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 15 | 135.37 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 17 | 135.42 | humidity | 90.0 | 90 | < th | dose independent | rect. | 20 | 10 |
| 23 | 135.91 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 24 | 135.95 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 25 | 136.04 | radiation | 20.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 26 | 136.07 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 31 | 136.15 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 32 | 136.17 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 34 | 136.17 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 43 | 136.39 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 53 | 136.66 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 6 |
| 63 | 136.82 | atmosphere | 1010.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 72 | 136.92 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 73 | 136.94 | atmosphere | 1010.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 86 | 137.14 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 90 | 137.25 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 91 | 137.28 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 92 | 137.31 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 9 |
| 94 | 137.32 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 95 | 137.33 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 98 | 137.34 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 101 | 137.36 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 24 | 3 |
| 102 | 137.36 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 105 | 137.39 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 133 | 137.58 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 136 | 137.60 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 142 | 137.64 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 143 | 137.64 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 149 | 137.67 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 152 | 137.68 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 154 | 137.70 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 160 | 137.76 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 164 | 137.76 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 179 | 137.87 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 183 | 137.88 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 191 | 137.90 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 15 | 6 |
| 208 | 137.98 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 11 | 3 |
| 224 | 138.06 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 16 | 1 |
| 235 | 138.10 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 239 | 138.12 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 240 | 138.12 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 242 | 138.12 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 4 |
| 252 | 138.16 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 259 | 138.19 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 264 | 138.21 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 284 | 138.27 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 287 | 138.28 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 292 | 138.28 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 347 | 138.41 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 349 | 138.42 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 356 | 138.44 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 393 | 138.50 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 409 | 138.54 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 429 | 138.57 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 19 | 9 |
| 445 | 138.59 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 19 | 15 |
| 483 | 138.66 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 14 |
| 511 | 138.71 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 536 | 138.73 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 19 | 15 |
| 547 | 138.75 | temperature | 25.0 | 43200 | > th | dose independent | sin | 11 | NA |
| 578 | 138.78 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 598 | 138.81 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 616 | 138.82 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 638 | 138.84 | wind | 5.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 640 | 138.84 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 651 | 138.84 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 653 | 138.84 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 19 | 17 |
| 665 | 138.86 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 669 | 138.86 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 2 | 8 |
| 681 | 138.87 | temperature | 25.0 | 43200 | > th | dose dependent | sin | 11 | NA |
| 698 | 138.89 | temperature | 25.0 | 43200 | < th | dose independent | sin | 11 | NA |
| 706 | 138.89 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 746 | 138.92 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 818 | 138.96 | atmosphere | 1010.0 | 4320 | > th | dose independent | sin | 4 | NA |
| 849 | 138.97 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 11 | 19 |
| 900 | 138.99 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 2 | 10 |
| 917 | 139.00 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 935 | 139.00 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 14 | 22 |