Os03g0780900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF858, methyltransferase-like family protein.
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Os03g0780900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF858, methyltransferase-like family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 165.13 | 0.604 | 7.41 | -1.68 | 1.81 | -0.689 | -1.89 | 0.635 | -0.692 | 15.2 | 90.02 | 268 | -- | -- |
| 166.28 | 0.601 | 7.42 | -1.62 | 1.79 | -0.702 | -2.24 | -- | -0.688 | 15.2 | 90.16 | 280 | -- | -- |
| 171.62 | 0.61 | 7.39 | -1.83 | 1.89 | -0.549 | -- | 1.47 | -0.658 | 15.4 | 89 | 223 | -- | -- |
| 181.58 | 0.628 | 7.42 | -1.66 | 1.87 | -0.549 | -- | -- | -0.66 | 15.4 | 90.01 | 280 | -- | -- |
| 260.85 | 0.752 | 7.42 | -1.96 | -- | -1.46 | -- | 1.69 | -0.636 | -- | 78 | 197 | -- | -- |
| 183.63 | 0.635 | 7.4 | -1.76 | 2.22 | -- | -1.76 | -- | -0.555 | 15.6 | -- | -- | -- | -- |
| 192.99 | 0.651 | 7.41 | -1.79 | 2.22 | -- | -- | -- | -0.565 | 15.7 | -- | -- | -- | -- |
| 271.04 | 0.767 | 7.4 | -1.91 | -- | -1.48 | -- | -- | -0.606 | -- | 76.53 | 189 | -- | -- |
| 255.93 | 0.745 | 7.41 | -- | 1.85 | -0.714 | -- | -- | -0.523 | 15.4 | 90 | 285 | -- | -- |
| 465.38 | 1.01 | 7.4 | -1.88 | -- | -- | -- | -- | -0.624 | -- | -- | -- | -- | -- |
| 277.53 | 0.779 | 7.36 | -- | 2.25 | -- | -- | -- | -0.365 | 15.7 | -- | -- | -- | -- |
| 366.77 | 0.892 | 7.35 | -- | -- | -1.47 | -- | -- | -0.395 | -- | 76.74 | 189 | -- | -- |
| 558.95 | 1.1 | 7.36 | -- | -- | -- | -- | -- | -0.415 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 153.84 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 2 | 155.57 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 3 | 155.62 | humidity | 90.0 | 270 | < th | dose independent | rect. | 6 | 10 |
| 4 | 156.08 | humidity | 90.0 | 270 | < th | dose independent | sin | 2 | NA |
| 9 | 156.83 | temperature | 15.0 | 720 | > th | dose independent | rect. | 1 | 14 |
| 11 | 157.23 | humidity | 90.0 | 270 | > th | dose independent | rect. | 24 | 21 |
| 15 | 157.43 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 10 |
| 20 | 157.61 | temperature | 15.0 | 720 | > th | dose independent | rect. | 5 | 6 |
| 23 | 157.89 | temperature | 15.0 | 720 | > th | dose independent | rect. | 3 | 10 |
| 33 | 158.39 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 11 |
| 36 | 158.55 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 12 |
| 38 | 158.64 | temperature | 15.0 | 270 | > th | dose independent | rect. | 4 | 23 |
| 65 | 159.56 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 23 | 18 |
| 71 | 159.69 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 20 |
| 77 | 159.88 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 11 |
| 78 | 159.89 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 82 | 159.97 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 6 |
| 83 | 160.00 | temperature | 15.0 | 90 | > th | dose independent | rect. | 8 | 19 |
| 85 | 160.03 | wind | 3.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 92 | 160.17 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 3 | 20 |
| 97 | 160.33 | humidity | 90.0 | 270 | < th | dose independent | rect. | 23 | 16 |
| 100 | 160.38 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 103 | 160.41 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 3 | 20 |
| 116 | 160.64 | wind | 3.0 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 152 | 161.23 | radiation | 1.0 | 270 | > th | dose independent | sin | 1 | NA |
| 154 | 161.24 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 1 | 20 |
| 157 | 161.31 | temperature | 15.0 | 720 | > th | dose independent | rect. | 17 | 22 |
| 167 | 161.49 | wind | 9.0 | 90 | < th | dose dependent | rect. | 16 | 11 |
| 169 | 161.50 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 12 |
| 179 | 161.64 | temperature | 15.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 193 | 161.77 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 205 | 161.92 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 23 | 10 |
| 216 | 162.02 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 18 | 10 |
| 227 | 162.10 | wind | 5.0 | 30 | < th | dose dependent | rect. | 3 | 5 |
| 234 | 162.19 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 6 |
| 236 | 162.21 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 243 | 162.32 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 244 | 162.33 | humidity | 90.0 | 270 | > th | dose independent | sin | 4 | NA |
| 250 | 162.39 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 258 | 162.43 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 23 |
| 275 | 162.59 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 11 |
| 285 | 162.62 | wind | 7.0 | 90 | < th | dose independent | rect. | 8 | 19 |
| 289 | 162.63 | wind | 7.0 | 90 | < th | dose dependent | rect. | 23 | 4 |
| 299 | 162.72 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 1 | 14 |
| 300 | 162.72 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 23 |
| 305 | 162.76 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 4 | 19 |
| 330 | 162.91 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 1 | 11 |
| 345 | 163.02 | humidity | 90.0 | 270 | < th | dose independent | rect. | 20 | 22 |
| 349 | 163.04 | temperature | 15.0 | 90 | > th | dose independent | rect. | 8 | 10 |
| 362 | 163.16 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 23 |
| 365 | 163.18 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 1 |
| 367 | 163.18 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 369 | 163.18 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 24 | 21 |
| 382 | 163.28 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 12 |
| 412 | 163.45 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 13 | 14 |
| 416 | 163.47 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 418 | 163.48 | radiation | 20.0 | 90 | < th | dose independent | rect. | 15 | 12 |
| 419 | 163.48 | wind | 5.0 | 10 | < th | dose dependent | rect. | 23 | 4 |
| 480 | 163.73 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 487 | 163.79 | temperature | 15.0 | 90 | > th | dose independent | sin | 10 | NA |
| 490 | 163.80 | temperature | 15.0 | 90 | > th | dose independent | sin | 22 | NA |
| 491 | 163.80 | temperature | 15.0 | 270 | > th | dose independent | sin | 0 | NA |
| 492 | 163.80 | temperature | 15.0 | 90 | > th | dose independent | sin | 4 | NA |
| 507 | 163.84 | humidity | 90.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 508 | 163.85 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 516 | 163.88 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 529 | 163.91 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 3 | 5 |
| 530 | 163.91 | radiation | 1.0 | 270 | < th | dose dependent | sin | 2 | NA |
| 545 | 163.97 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 546 | 163.97 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 3 | 1 |
| 554 | 164.00 | wind | 5.0 | 90 | < th | dose independent | rect. | 23 | 4 |
| 556 | 164.00 | wind | 9.0 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 560 | 164.01 | wind | 3.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 572 | 164.05 | humidity | 90.0 | 270 | > th | dose independent | rect. | 7 | 22 |
| 576 | 164.06 | temperature | 20.0 | 720 | > th | dose independent | rect. | 15 | 2 |
| 598 | 164.10 | atmosphere | 1015.0 | 720 | < th | dose independent | sin | 3 | NA |
| 601 | 164.10 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 7 | 13 |
| 623 | 164.19 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 630 | 164.21 | humidity | 90.0 | 720 | < th | dose independent | rect. | 15 | 2 |
| 642 | 164.24 | temperature | 15.0 | 90 | > th | dose independent | rect. | 23 | 4 |
| 671 | 164.29 | temperature | 15.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 677 | 164.29 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 11 | 9 |
| 686 | 164.31 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 719 | 164.37 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 720 | 164.37 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 729 | 164.39 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 5 |
| 731 | 164.39 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 743 | 164.41 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 3 | 1 |
| 754 | 164.44 | wind | 7.0 | 1440 | < th | dose independent | rect. | 4 | 4 |
| 768 | 164.47 | humidity | 90.0 | 90 | > th | dose independent | rect. | 8 | 15 |
| 772 | 164.48 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 16 | 11 |
| 774 | 164.48 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 16 | 11 |
| 781 | 164.50 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 786 | 164.51 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 12 | 4 |
| 795 | 164.53 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 807 | 164.55 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 836 | 164.60 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 12 | 4 |
| 849 | 164.65 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 866 | 164.68 | radiation | 20.0 | 90 | < th | dose independent | rect. | 13 | 14 |
| 874 | 164.70 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 878 | 164.71 | temperature | 15.0 | 90 | > th | dose independent | rect. | 16 | 11 |
| 890 | 164.73 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 901 | 164.76 | temperature | 15.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 919 | 164.79 | humidity | 90.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 924 | 164.80 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 14 | 3 |
| 925 | 164.80 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 13 |
| 926 | 164.80 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 13 |
| 928 | 164.81 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 1 | 14 |
| 934 | 164.82 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 20 |
| 937 | 164.83 | radiation | 1.0 | 720 | > th | dose independent | rect. | 15 | 2 |
| 983 | 164.88 | temperature | 15.0 | 90 | > th | dose independent | rect. | 3 | 20 |
| 987 | 164.89 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 24 | 16 |
| 988 | 164.89 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 24 | 16 |
| 995 | 164.91 | wind | 9.0 | 270 | < th | dose dependent | rect. | 23 | 1 |