Os03g0775700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0775700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 522.1 | 1.07 | 5.1 | -3.47 | 0.511 | 1.12 | 1.66 | 4.76 | -0.42 | 5.85 | 19.9 | 856 | -- | -- |
| 533.99 | 1.08 | 5.22 | -4.56 | 0.614 | 1.39 | 1.01 | -- | -0.701 | 5.41 | 22.57 | 877 | -- | -- |
| 523.06 | 1.07 | 5.09 | -3.35 | 0.369 | 0.921 | -- | 4.45 | -0.381 | 3.01 | 19.46 | 1244 | -- | -- |
| 532.99 | 1.08 | 5.23 | -4.57 | 0.319 | 1.22 | -- | -- | -0.668 | 3.66 | 23.92 | 1178 | -- | -- |
| 530.52 | 1.07 | 5.1 | -3.37 | -- | 1.04 | -- | 4.51 | -0.405 | -- | 19.6 | 1205 | -- | -- |
| 578.23 | 1.13 | 5.19 | -4.18 | 0.53 | -- | 0.797 | -- | -0.477 | 2.7 | -- | -- | -- | -- |
| 580.4 | 1.13 | 5.19 | -4.2 | 0.53 | -- | -- | -- | -0.482 | 2.49 | -- | -- | -- | -- |
| 538.49 | 1.08 | 5.23 | -4.59 | -- | 1.31 | -- | -- | -0.665 | -- | 24 | 1175 | -- | -- |
| 1040.03 | 1.51 | 5.08 | -- | 0.242 | -0.525 | -- | -- | 0.0412 | 1.95 | 23.92 | 1178 | -- | -- |
| 596.94 | 1.14 | 5.19 | -4.17 | -- | -- | -- | -- | -0.469 | -- | -- | -- | -- | -- |
| 1044.58 | 1.51 | 5.09 | -- | 0.449 | -- | -- | -- | -0.0145 | 2.35 | -- | -- | -- | -- |
| 799.57 | 1.32 | 4.91 | -- | -- | -2.58 | -- | -- | 0.766 | -- | -0.2823 | 47520 | -- | -- |
| 1056.55 | 1.52 | 5.09 | -- | -- | -- | -- | -- | -0.0056 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 511.77 | wind | 1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 2 | 512.03 | wind | 3 | 14400 | < th | dose dependent | rect. | 13 | 14 |
| 6 | 513.28 | temperature | 20 | 720 | > th | dose dependent | sin | 15 | NA |
| 7 | 513.38 | wind | 1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 8 | 513.41 | humidity | 90 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 9 | 513.57 | humidity | 90 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 12 | 513.76 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 22 | 514.80 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 10 |
| 24 | 514.88 | wind | 1 | 14400 | > th | dose independent | rect. | 13 | 13 |
| 26 | 514.99 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 17 |
| 31 | 515.17 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 18 |
| 35 | 515.35 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 7 |
| 36 | 515.35 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 14 |
| 37 | 515.40 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 49 | 515.84 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 21 |
| 64 | 516.18 | wind | 3 | 14400 | < th | dose dependent | rect. | 13 | 18 |
| 66 | 516.25 | wind | 3 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 67 | 516.26 | temperature | 30 | 720 | < th | dose dependent | sin | 17 | NA |
| 79 | 516.48 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 83 | 516.53 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 93 | 516.63 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 18 |
| 97 | 516.70 | wind | 3 | 14400 | < th | dose dependent | sin | 15 | NA |
| 102 | 516.78 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 20 |
| 110 | 516.93 | wind | 1 | 14400 | < th | dose independent | rect. | 13 | 13 |
| 126 | 517.11 | wind | 1 | 14400 | > th | dose independent | rect. | 6 | 18 |
| 128 | 517.18 | temperature | 10 | 270 | > th | dose dependent | sin | 12 | NA |
| 168 | 517.82 | temperature | 30 | 270 | < th | dose dependent | sin | 13 | NA |
| 185 | 518.00 | humidity | 90 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 186 | 518.00 | wind | 1 | 14400 | < th | dose independent | rect. | 15 | 11 |
| 210 | 518.33 | wind | 3 | 14400 | < th | dose dependent | rect. | 10 | 22 |
| 228 | 518.60 | wind | 1 | 14400 | > th | dose independent | rect. | 6 | 20 |
| 257 | 518.84 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 14 |
| 351 | 519.84 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 15 |
| 359 | 519.93 | humidity | 80 | 43200 | > th | dose dependent | rect. | 3 | 6 |
| 393 | 520.15 | wind | 3 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 399 | 520.17 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 23 |
| 413 | 520.25 | temperature | 25 | 270 | < th | dose dependent | rect. | 12 | 19 |
| 465 | 520.60 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 21 |
| 523 | 521.02 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 2 |
| 533 | 521.13 | wind | 3 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 575 | 521.35 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 23 |
| 592 | 521.45 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 15 |
| 635 | 521.60 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 641 | 521.61 | wind | 3 | 14400 | < th | dose independent | rect. | 13 | 19 |
| 665 | 521.72 | wind | 3 | 14400 | > th | dose independent | rect. | 13 | 19 |
| 683 | 521.81 | wind | 3 | 14400 | < th | dose dependent | no | NA | NA |
| 782 | 522.24 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 783 | 522.24 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 795 | 522.36 | wind | 1 | 14400 | > th | dose independent | sin | 17 | NA |
| 816 | 522.42 | humidity | 90 | 43200 | > th | dose independent | rect. | 3 | 3 |
| 882 | 522.70 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 20 |
| 883 | 522.71 | wind | 1 | 43200 | > th | dose independent | rect. | 15 | 8 |
| 888 | 522.74 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 901 | 522.77 | wind | 3 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 907 | 522.80 | wind | 1 | 14400 | > th | dose independent | rect. | 13 | 10 |
| 922 | 522.89 | wind | 3 | 14400 | < th | dose dependent | rect. | 18 | 23 |
| 999 | 523.21 | humidity | 80 | 43200 | > th | dose dependent | rect. | 20 | 13 |