Os03g0774400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0774400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 152.47 | 0.58 | 7 | -3.44 | 0.0963 | -2.02 | 0.454 | -1.14 | -0.706 | 22 | 22.7 | 2291 | -- | -- |
| 155.34 | 0.58 | 7.04 | -3.85 | 0.101 | -2.02 | 0.527 | -- | -0.797 | 21.3 | 22.7 | 2293 | -- | -- |
| 153.21 | 0.576 | 7 | -3.43 | 0.1 | -2.03 | -- | -1.22 | -0.703 | 21.1 | 22.7 | 2312 | -- | -- |
| 156.54 | 0.583 | 7.05 | -3.87 | 0.0992 | -2.03 | -- | -- | -0.812 | 21.4 | 22.69 | 2295 | -- | -- |
| 153.75 | 0.578 | 7 | -3.43 | -- | -2.04 | -- | -1.24 | -0.705 | -- | 22.67 | 2312 | -- | -- |
| 312.43 | 0.829 | 6.87 | -3.03 | 0.304 | -- | 0.683 | -- | -0.0317 | 23 | -- | -- | -- | -- |
| 314.39 | 0.83 | 6.87 | -3.06 | 0.3 | -- | -- | -- | -0.0344 | 23.2 | -- | -- | -- | -- |
| 157.11 | 0.584 | 7.04 | -3.87 | -- | -2.05 | -- | -- | -0.818 | -- | 22.68 | 2295 | -- | -- |
| 510.18 | 1.05 | 6.9 | -- | 0.0977 | -1.1 | -- | -- | -0.0899 | 20.4 | 22.9 | 2079 | -- | -- |
| 320.02 | 0.836 | 6.87 | -3.06 | -- | -- | -- | -- | -0.0318 | -- | -- | -- | -- | -- |
| 561.64 | 1.11 | 6.8 | -- | 0.276 | -- | -- | -- | 0.307 | 22.4 | -- | -- | -- | -- |
| 497.32 | 1.04 | 6.87 | -- | -- | -1.17 | -- | -- | -0.0559 | -- | 22.3 | 889 | -- | -- |
| 566.32 | 1.11 | 6.79 | -- | -- | -- | -- | -- | 0.307 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 151.61 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 3 | 153.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 4 | 153.84 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 14 |
| 20 | 155.19 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 21 | 155.29 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 10 |
| 41 | 155.76 | temperature | 15 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 44 | 155.81 | temperature | 15 | 4320 | > th | dose dependent | rect. | 23 | 5 |
| 52 | 155.90 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 2 |
| 63 | 156.01 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 10 |
| 73 | 156.19 | temperature | 15 | 4320 | > th | dose dependent | rect. | 1 | 3 |
| 96 | 156.36 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 111 | 156.51 | temperature | 25 | 4320 | < th | dose dependent | rect. | 23 | 5 |
| 134 | 156.68 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 3 |
| 147 | 156.75 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 5 |
| 205 | 157.06 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 15 |
| 346 | 157.82 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 481 | 158.59 | temperature | 30 | 1440 | < th | dose dependent | sin | 11 | NA |
| 634 | 159.28 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 4 |