Os03g0774200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to NADH-ubiquinone oxidoreductase subunit 8 (EC 1.6.5.3).
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Os03g0774200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to NADH-ubiquinone oxidoreductase subunit 8 (EC 1.6.5.3).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.69 | 0.203 | 11.2 | -0.0618 | 0.17 | -0.437 | -0.301 | -0.466 | -0.238 | 7.74 | 68.18 | 1589 | -- | -- |
| 18.89 | 0.202 | 11.2 | -0.0887 | 0.23 | -0.462 | -0.34 | -- | -0.257 | 7.52 | 69.5 | 1830 | -- | -- |
| 18.76 | 0.202 | 11.2 | -0.0604 | 0.247 | -0.425 | -- | -0.422 | -0.237 | 7.76 | 66.16 | 1883 | -- | -- |
| 19.07 | 0.203 | 11.2 | -0.116 | 0.261 | -0.464 | -- | -- | -0.249 | 7.74 | 66.04 | 1886 | -- | -- |
| 20.75 | 0.212 | 11.2 | -0.0817 | -- | -0.43 | -- | -0.194 | -0.28 | -- | 67.04 | 2914 | -- | -- |
| 22.59 | 0.223 | 11.2 | -0.121 | 0.16 | -- | -0.244 | -- | -0.196 | 8.58 | -- | -- | -- | -- |
| 22.77 | 0.223 | 11.2 | -0.128 | 0.16 | -- | -- | -- | -0.195 | 8.99 | -- | -- | -- | -- |
| 20.78 | 0.212 | 11.2 | -0.107 | -- | -0.456 | -- | -- | -0.289 | -- | 67.88 | 2907 | -- | -- |
| 19.42 | 0.205 | 11.2 | -- | 0.263 | -0.469 | -- | -- | -0.24 | 7.77 | 66.09 | 1893 | -- | -- |
| 24.24 | 0.23 | 11.2 | -0.128 | -- | -- | -- | -- | -0.194 | -- | -- | -- | -- | -- |
| 23.2 | 0.225 | 11.2 | -- | 0.16 | -- | -- | -- | -0.181 | 9.05 | -- | -- | -- | -- |
| 21.03 | 0.214 | 11.2 | -- | -- | -0.446 | -- | -- | -0.332 | -- | 66 | 7219 | -- | -- |
| 24.67 | 0.232 | 11.2 | -- | -- | -- | -- | -- | -0.18 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.14 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 2 | 18.30 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 3 | 18.35 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 4 | 18.36 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 6 | 18.37 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 11 | 5 |
| 7 | 18.37 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 8 | 18.40 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 12 | 18.44 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 25 | 18.50 | humidity | 60.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 26 | 18.51 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 11 | 3 |
| 33 | 18.52 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 10 | 6 |
| 69 | 18.58 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 23 | 17 |
| 109 | 18.63 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 24 | 19 |
| 115 | 18.64 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 224 | 18.72 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 7 | 22 |
| 225 | 18.73 | humidity | 80.0 | 1440 | > th | dose dependent | sin | 2 | NA |
| 269 | 18.76 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 312 | 18.78 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 328 | 18.79 | humidity | 80.0 | 14400 | > th | dose independent | sin | 23 | NA |
| 381 | 18.81 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 14 |
| 383 | 18.81 | humidity | 60.0 | 1440 | > th | dose dependent | sin | 5 | NA |
| 423 | 18.82 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 426 | 18.83 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 427 | 18.83 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 436 | 18.83 | humidity | 70.0 | 1440 | > th | dose dependent | no | NA | NA |
| 464 | 18.84 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 5 | 11 |
| 479 | 18.84 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 488 | 18.85 | humidity | 80.0 | 14400 | > th | dose dependent | sin | 23 | NA |
| 556 | 18.87 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 602 | 18.88 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 20 |
| 611 | 18.89 | humidity | 80.0 | 14400 | < th | dose independent | sin | 23 | NA |
| 653 | 18.90 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 13 |
| 687 | 18.91 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 781 | 18.94 | humidity | 80.0 | 720 | < th | dose independent | rect. | 19 | 22 |
| 782 | 18.94 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 22 | 22 |
| 936 | 18.98 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 22 | 17 |