Os03g0773100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Myb/SANT domain protein.
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Os03g0773100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Myb/SANT domain protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.66 | 0.224 | 10.5 | -0.209 | 0.649 | 0.145 | 0.0871 | 1.48 | 0.00642 | 5.18 | 31.26 | 1093 | -- | -- |
| 22.95 | 0.223 | 10.6 | -0.443 | 0.645 | 0.276 | 0.254 | -- | 0.0137 | 5.15 | 30.3 | 1084 | -- | -- |
| 22.67 | 0.222 | 10.5 | -0.195 | 0.648 | 0.134 | -- | 1.57 | 0.00572 | 5.17 | 31.4 | 1094 | -- | -- |
| 22.75 | 0.222 | 10.6 | -0.437 | 0.653 | 0.314 | -- | -- | 0.00676 | 5.17 | 31.38 | 1081 | -- | -- |
| 44.18 | 0.31 | 10.5 | 0.0333 | -- | 0.0248 | -- | 2.96 | 0.0266 | -- | 32.21 | 1171 | -- | -- |
| 27.15 | 0.244 | 10.6 | -0.362 | 0.671 | -- | 0.124 | -- | -0.0485 | 4.93 | -- | -- | -- | -- |
| 27.19 | 0.244 | 10.6 | -0.362 | 0.672 | -- | -- | -- | -0.0491 | 4.92 | -- | -- | -- | -- |
| 44.57 | 0.311 | 10.6 | -0.426 | -- | 0.358 | -- | -- | 0.0308 | -- | 32.08 | 1173 | -- | -- |
| 27.53 | 0.244 | 10.6 | -- | 0.645 | 0.26 | -- | -- | 0.0416 | 5.1 | 33.12 | 1024 | -- | -- |
| 51 | 0.334 | 10.6 | -0.337 | -- | -- | -- | -- | -0.0318 | -- | -- | -- | -- | -- |
| 30.65 | 0.259 | 10.6 | -- | 0.666 | -- | -- | -- | -0.00879 | 4.94 | -- | -- | -- | -- |
| 49.15 | 0.327 | 10.6 | -- | -- | 0.309 | -- | -- | 0.0568 | -- | 33.1 | 1136 | -- | -- |
| 54 | 0.343 | 10.6 | -- | -- | -- | -- | -- | 0.00562 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.70 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 11 |
| 2 | 21.72 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 3 |
| 5 | 21.84 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 13 |
| 17 | 22.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 10 |
| 22 | 22.21 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 30 | 22.34 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 12 |
| 31 | 22.35 | temperature | 30 | 720 | > th | dose independent | rect. | 16 | 3 |
| 68 | 22.50 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 70 | 22.51 | temperature | 30 | 720 | < th | dose independent | sin | 14 | NA |
| 72 | 22.53 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 5 |
| 83 | 22.57 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 14 |
| 102 | 22.59 | humidity | 80 | 720 | < th | dose dependent | rect. | 16 | 16 |
| 108 | 22.62 | humidity | 80 | 720 | < th | dose dependent | rect. | 16 | 6 |
| 114 | 22.63 | humidity | 80 | 720 | < th | dose dependent | rect. | 16 | 14 |
| 124 | 22.66 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 13 |
| 126 | 22.67 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 3 |
| 145 | 22.69 | temperature | 30 | 720 | > th | dose independent | sin | 13 | NA |
| 208 | 22.78 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 10 |
| 209 | 22.78 | temperature | 10 | 720 | > th | dose dependent | sin | 18 | NA |
| 210 | 22.78 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 5 |
| 231 | 22.79 | temperature | 30 | 720 | > th | dose dependent | sin | 12 | NA |
| 267 | 22.84 | humidity | 80 | 720 | < th | dose dependent | sin | 13 | NA |
| 314 | 22.90 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 17 |
| 392 | 22.98 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 409 | 23.02 | humidity | 70 | 720 | < th | dose independent | rect. | 16 | 3 |
| 419 | 23.03 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 14 |
| 426 | 23.04 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 12 |
| 508 | 23.10 | humidity | 70 | 720 | < th | dose dependent | rect. | 16 | 1 |
| 518 | 23.11 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 7 |
| 546 | 23.14 | temperature | 20 | 10 | > th | dose dependent | rect. | 18 | 15 |
| 556 | 23.16 | temperature | 30 | 10 | < th | dose dependent | sin | 12 | NA |
| 566 | 23.17 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 607 | 23.20 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 3 |
| 614 | 23.21 | temperature | 10 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 686 | 23.25 | humidity | 50 | 720 | > th | dose dependent | sin | 15 | NA |
| 769 | 23.32 | radiation | 20 | 720 | > th | dose dependent | rect. | 16 | 1 |
| 813 | 23.33 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 13 |
| 847 | 23.36 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 1 |
| 907 | 23.38 | temperature | 10 | 90 | > th | dose dependent | sin | 13 | NA |