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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0769900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.79 (0.0315) R2 : 0.0126
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.16 (0.0663) R2dN8 : 0.0163 R2N8 : 0.0126
σ : 0.593
deviance : 161.22
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
150.53 0.576 2.84 0.443 0.131 2.05 0.314 3.61 0.27 1.68 19.22 3677 -- --
154.43 0.579 2.76 0.537 0.123 0.627 0.323 -- 0.326 0.121 22.7 3671 -- --
150.34 0.571 2.86 0.415 0.119 2.51 -- 4.69 0.241 2.32 18.39 3657 -- --
154.51 0.579 2.75 0.497 0.121 0.6 -- -- 0.311 1.93 22.36 3688 -- --
150.98 0.572 2.89 0.486 -- 3.73 -- 7.23 0.251 -- 17.8 3475 -- --
159.07 0.591 2.78 0.22 0.0998 -- 0.289 -- 0.183 1.68 -- -- -- --
159.38 0.591 2.78 0.21 0.103 -- -- -- 0.181 2.32 -- -- -- --
155.35 0.581 2.75 0.488 -- 0.603 -- -- 0.309 -- 22.23 3320 -- --
158.64 0.587 2.78 -- 0.13 0.305 -- -- 0.216 2.3 23.61 2492 -- --
160 0.591 2.78 0.215 -- -- -- -- 0.184 -- -- -- -- --
160.55 0.593 2.79 -- 0.107 -- -- -- 0.158 2.36 -- -- -- --
159.59 0.588 2.77 -- -- 0.29 -- -- 0.217 -- 28.6 1719 -- --
161.22 0.593 2.79 -- -- -- -- -- 0.16 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 140.89 wind 1.0 30 > th dose dependent rect. 2 1
2 142.71 wind 7.0 90 > th dose independent rect. 21 4
20 143.62 wind 7.0 90 > th dose independent rect. 23 6
24 143.63 wind 5.0 90 > th dose independent rect. 1 1
36 143.63 wind 5.0 90 > th dose dependent rect. 1 1
53 143.65 precipitation 0.1 270 > th dose independent rect. 22 1
54 143.65 precipitation 0.1 270 > th dose dependent rect. 22 1
75 144.26 wind 7.0 90 > th dose dependent rect. 21 4
101 145.02 wind 3.0 10 > th dose independent rect. 2 1
109 145.40 humidity 50.0 10 < th dose independent rect. 11 1
201 145.40 humidity 50.0 10 < th dose dependent rect. 11 1
302 145.65 temperature 30.0 10 < th dose dependent rect. 2 1
307 145.74 atmosphere 1010.0 30 < th dose dependent rect. 2 1
312 145.81 temperature 20.0 10 > th dose independent rect. 2 1
328 145.98 humidity 90.0 10 > th dose independent rect. 2 1
329 146.04 temperature 25.0 10 < th dose independent rect. 2 1
340 146.12 atmosphere 1000.0 10 > th dose independent rect. 2 1
354 146.30 humidity 50.0 10 > th dose dependent rect. 2 1
358 146.31 wind 5.0 10 < th dose independent rect. 2 1
361 146.31 temperature 15.0 10 > th dose independent rect. 3 23
363 146.32 temperature 10.0 10 > th dose independent rect. 2 1
366 146.32 humidity 50.0 10 > th dose independent rect. 2 1
370 146.32 atmosphere 1010.0 10 < th dose independent rect. 2 1
372 146.32 radiation 1.0 10 < th dose independent rect. 2 1
377 146.32 precipitation 0.1 10 < th dose independent rect. 2 1
379 146.32 radiation 1.0 10 < th dose dependent rect. 2 1
384 146.32 precipitation 0.1 10 < th dose dependent rect. 2 1
415 146.69 temperature 10.0 10 > th dose dependent rect. 2 1
449 146.80 atmosphere 995.0 10 > th dose dependent rect. 2 1
450 146.82 wind 9.0 10 < th dose dependent rect. 2 1
451 146.83 precipitation 0.1 720 < th dose independent rect. 15 8
453 146.83 precipitation 0.1 720 < th dose dependent rect. 15 8
474 147.01 wind 9.0 10 < th dose independent rect. 3 23
484 147.23 precipitation 0.1 10 < th dose independent rect. 3 23
485 147.23 precipitation 0.1 10 < th dose dependent rect. 3 23
489 147.30 wind 7.0 270 > th dose dependent rect. 21 1
491 147.31 wind 7.0 270 > th dose independent rect. 21 1
493 147.33 wind 1.0 30 < th dose independent rect. 2 1
507 147.42 precipitation 0.1 720 < th dose independent rect. 11 16
508 147.42 precipitation 0.1 720 < th dose dependent rect. 11 16
541 147.83 wind 9.0 4320 < th dose independent rect. 3 1
552 148.23 wind 1.0 720 > th dose independent rect. 15 8
555 148.27 radiation 1.0 43200 < th dose dependent rect. 3 1
556 148.29 precipitation 0.1 1440 < th dose independent rect. 23 1
557 148.29 precipitation 0.1 1440 < th dose dependent rect. 23 1
562 148.36 humidity 50.0 10 > th dose independent rect. 3 23
582 148.67 atmosphere 995.0 30 > th dose independent rect. 3 23
588 148.74 precipitation 0.1 720 > th dose independent rect. 24 1
589 148.74 precipitation 0.1 720 > th dose dependent rect. 24 1
592 148.76 radiation 40.0 43200 < th dose dependent rect. 23 1
593 148.78 wind 7.0 720 > th dose dependent rect. 24 8
595 148.79 wind 5.0 720 > th dose independent rect. 1 1
610 148.79 wind 5.0 720 > th dose dependent rect. 1 1
635 148.93 wind 3.0 30 < th dose independent rect. 22 1
636 148.94 precipitation 0.1 30 < th dose independent rect. 22 1
637 148.94 precipitation 0.1 30 < th dose dependent rect. 22 1
641 148.99 atmosphere 1005.0 30 > th dose independent rect. 22 1
642 148.99 atmosphere 1005.0 10 > th dose dependent rect. 22 1
655 149.07 temperature 25.0 10 > th dose independent rect. 22 1
657 149.09 humidity 90.0 30 < th dose independent rect. 22 1
658 149.09 temperature 25.0 30 > th dose dependent rect. 22 1
662 149.12 wind 3.0 30 < th dose dependent rect. 22 1
664 149.17 wind 9.0 1440 < th dose independent rect. 23 1
665 149.17 temperature 10.0 1440 > th dose independent rect. 23 1
668 149.17 temperature 30.0 1440 < th dose independent rect. 23 1
672 149.17 humidity 50.0 1440 > th dose independent rect. 23 1
682 149.17 atmosphere 995.0 1440 > th dose independent rect. 23 1
683 149.17 radiation 1.0 1440 < th dose independent rect. 23 1
703 149.17 temperature 10.0 1440 > th dose independent rect. 24 23
706 149.17 radiation 1.0 1440 < th dose dependent rect. 23 1
714 149.20 radiation 40.0 10 < th dose dependent rect. 3 23
722 149.28 humidity 90.0 30 < th dose dependent rect. 22 1
740 149.39 temperature 10.0 1440 > th dose independent rect. 3 1
743 149.39 temperature 30.0 1440 < th dose independent rect. 3 1
747 149.39 humidity 50.0 1440 > th dose independent rect. 3 1
756 149.39 atmosphere 995.0 1440 > th dose independent rect. 3 1
757 149.39 radiation 1.0 1440 < th dose independent rect. 3 1
777 149.39 temperature 10.0 1440 > th dose independent rect. 4 23
780 149.39 radiation 1.0 1440 < th dose dependent rect. 3 1
826 149.61 wind 1.0 30 > th dose independent rect. 22 1
830 149.61 temperature 10.0 30 > th dose independent rect. 22 1
832 149.61 temperature 30.0 30 < th dose independent rect. 22 1
833 149.61 humidity 50.0 30 > th dose independent rect. 22 1
836 149.61 atmosphere 995.0 30 > th dose independent rect. 22 1
837 149.61 atmosphere 1010.0 30 < th dose independent rect. 22 1
839 149.61 radiation 1.0 30 < th dose independent rect. 22 1
844 149.61 temperature 10.0 30 > th dose independent rect. 23 23
845 149.61 radiation 40.0 30 < th dose independent rect. 3 23
846 149.61 radiation 1.0 30 < th dose dependent rect. 22 1
857 149.68 temperature 20.0 10 < th dose independent rect. 11 1
863 149.68 humidity 90.0 90 > th dose independent rect. 10 1
865 149.68 precipitation 0.1 90 > th dose independent rect. 10 1
882 149.68 wind 1.0 10 > th dose independent rect. 23 23
883 149.68 temperature 20.0 90 < th dose dependent rect. 10 1
884 149.68 temperature 20.0 10 < th dose dependent rect. 11 1
890 149.68 humidity 90.0 90 > th dose dependent rect. 10 1
892 149.68 precipitation 0.1 90 > th dose dependent rect. 10 1
921 149.75 humidity 50.0 30 > th dose dependent rect. 22 1
933 149.86 humidity 50.0 720 > th dose independent rect. 3 8
936 149.91 temperature 10.0 720 > th dose independent rect. 3 8
937 149.91 atmosphere 995.0 720 > th dose independent rect. 3 8
938 149.91 temperature 10.0 720 > th dose independent rect. 11 16
939 149.92 atmosphere 995.0 720 > th dose independent rect. 11 16
940 149.94 atmosphere 1005.0 270 < th dose independent rect. 21 4
946 150.03 atmosphere 995.0 720 > th dose independent rect. 15 8
960 150.10 temperature 10.0 720 > th dose independent rect. 15 8
961 150.10 temperature 10.0 720 > th dose independent rect. 23 16
963 150.12 atmosphere 1015.0 30 < th dose dependent rect. 22 1
974 150.20 atmosphere 995.0 720 > th dose independent rect. 23 16
1000 150.38 temperature 30.0 30 < th dose dependent rect. 22 1