Os03g0769100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 9S ribosomal protein.
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Os03g0769100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 9S ribosomal protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60.65 | 0.366 | 13.6 | 0.584 | 1.22 | 0.584 | -0.33 | 3.52 | -0.537 | 20.8 | 6.826 | 11438 | -- | -- |
| 72.09 | 0.395 | 13.8 | -0.299 | 1.22 | 0.279 | -0.349 | -- | -0.787 | 20.9 | 2.489 | 47520 | -- | -- |
| 61 | 0.364 | 13.6 | 0.592 | 1.22 | 0.586 | -- | 3.51 | -0.538 | 20.8 | 6.826 | 11509 | -- | -- |
| 72.5 | 0.397 | 13.8 | -0.284 | 1.22 | 0.276 | -- | -- | -0.786 | 20.9 | 2.632 | 47520 | -- | -- |
| 144.19 | 0.559 | 13.6 | 0.597 | -- | 0.672 | -- | 3.72 | -0.558 | -- | 7.616 | 10878 | -- | -- |
| 72.87 | 0.4 | 13.7 | -0.0076 | 1.22 | -- | -0.341 | -- | -0.672 | 20.9 | -- | -- | -- | -- |
| 73.26 | 0.401 | 13.7 | 0.00387 | 1.22 | -- | -- | -- | -0.672 | 20.9 | -- | -- | -- | -- |
| 154.29 | 0.579 | 13.8 | -0.494 | -- | 0.471 | -- | -- | -0.915 | -- | 22.17 | 47520 | -- | -- |
| 72.93 | 0.4 | 13.7 | -- | 1.23 | 0.178 | -- | -- | -0.693 | 21 | 1.881 | 47520 | -- | -- |
| 158.11 | 0.588 | 13.7 | 0.00389 | -- | -- | -- | -- | -0.68 | -- | -- | -- | -- | -- |
| 73.26 | 0.4 | 13.7 | -- | 1.22 | -- | -- | -- | -0.672 | 20.9 | -- | -- | -- | -- |
| 155.85 | 0.583 | 13.7 | -- | -- | 0.305 | -- | -- | -0.698 | -- | 25 | 47520 | -- | -- |
| 158.11 | 0.587 | 13.7 | -- | -- | -- | -- | -- | -0.681 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.02 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 2 | 57.08 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 4 | 57.10 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 7 |
| 7 | 57.21 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 18 |
| 14 | 57.50 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 24 | 57.71 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 31 | 57.78 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 18 |
| 33 | 57.81 | humidity | 90 | 14400 | < th | dose independent | rect. | 5 | 18 |
| 35 | 57.82 | humidity | 90 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 46 | 57.91 | humidity | 90 | 14400 | > th | dose dependent | sin | 23 | NA |
| 58 | 57.99 | humidity | 90 | 14400 | > th | dose independent | rect. | 8 | 16 |
| 59 | 57.99 | humidity | 80 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 75 | 58.04 | humidity | 90 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 76 | 58.04 | humidity | 90 | 14400 | < th | dose independent | rect. | 8 | 16 |
| 81 | 58.06 | humidity | 90 | 14400 | < th | dose independent | rect. | 10 | 13 |
| 107 | 58.13 | radiation | 1 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 109 | 58.13 | radiation | 1 | 1440 | < th | dose dependent | rect. | 10 | 2 |
| 117 | 58.17 | humidity | 90 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 200 | 58.38 | humidity | 90 | 14400 | < th | dose independent | sin | 20 | NA |
| 235 | 58.47 | humidity | 90 | 14400 | > th | dose independent | sin | 19 | NA |
| 245 | 58.48 | humidity | 80 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 277 | 58.55 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 342 | 58.67 | humidity | 90 | 14400 | > th | dose independent | rect. | 17 | 21 |
| 358 | 58.70 | humidity | 80 | 14400 | > th | dose dependent | rect. | 16 | 6 |
| 374 | 58.73 | humidity | 70 | 43200 | > th | dose dependent | rect. | 14 | 14 |
| 403 | 58.77 | humidity | 70 | 43200 | > th | dose dependent | sin | 15 | NA |
| 423 | 58.79 | humidity | 70 | 43200 | > th | dose dependent | rect. | 15 | 12 |
| 429 | 58.81 | humidity | 90 | 14400 | > th | dose independent | no | NA | NA |
| 431 | 58.81 | wind | 5 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 474 | 58.87 | humidity | 90 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 510 | 58.93 | wind | 3 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 547 | 58.98 | humidity | 90 | 14400 | > th | dose dependent | rect. | 19 | 5 |
| 565 | 59.01 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 5 |
| 567 | 59.01 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 5 |
| 586 | 59.04 | wind | 5 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 612 | 59.06 | temperature | 25 | 14400 | < th | dose dependent | rect. | 6 | 14 |
| 618 | 59.07 | temperature | 25 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 621 | 59.07 | temperature | 25 | 14400 | < th | dose dependent | rect. | 9 | 13 |
| 660 | 59.11 | temperature | 25 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 686 | 59.13 | temperature | 25 | 14400 | < th | dose dependent | sin | 22 | NA |
| 820 | 59.26 | humidity | 90 | 14400 | < th | dose independent | rect. | 17 | 21 |
| 882 | 59.33 | temperature | 25 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 884 | 59.33 | temperature | 25 | 14400 | < th | dose dependent | rect. | 7 | 4 |
| 928 | 59.37 | humidity | 80 | 43200 | > th | dose independent | rect. | 23 | 19 |
| 943 | 59.38 | wind | 3 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 971 | 59.41 | humidity | 80 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 983 | 59.42 | humidity | 80 | 43200 | > th | dose independent | rect. | 24 | 17 |
| 992 | 59.43 | humidity | 90 | 14400 | < th | dose independent | no | NA | NA |