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Os03g0765100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0157) R2 : 0.413
β1 : 0.842 (0.0577) R2dD : 0.285 R2D : 0.123
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.436 (0.0336) R2dN8 : 0.29 R2N8 : 0.129
σ : 0.295
deviance : 39.98
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
25.92 0.239 11.4 0.912 0.0646 0.399 -0.955 -0.636 0.445 10.7 0.4205 11 -- --
26.29 0.239 11.4 0.9 0.0528 0.395 -0.264 -- 0.44 10.3 0.3799 11 -- --
26.39 0.239 11.4 0.862 0.059 0.386 -- 0.0901 0.439 10.3 0.3104 14 -- --
26.42 0.239 11.4 0.868 0.0489 0.377 -- -- 0.436 8.97 0.2983 15 -- --
26.36 0.239 11.4 0.859 -- 0.354 -- 0.117 0.438 -- 0.1953 21 -- --
29.32 0.254 11.4 0.839 0.408 -- 0.219 -- 0.432 24 -- -- -- --
29.53 0.254 11.4 0.83 0.407 -- -- -- 0.431 24 -- -- -- --
26.44 0.239 11.4 0.864 -- 0.353 -- -- 0.436 -- 0.2127 21 -- --
45.89 0.317 11.4 -- 0.118 0.27 -- -- 0.348 1.71 2.472 7 -- --
39.98 0.295 11.4 0.842 -- -- -- -- 0.436 -- -- -- -- --
47.67 0.323 11.4 -- 0.418 -- -- -- 0.338 0.11 -- -- -- --
46.03 0.316 11.4 -- -- 0.334 -- -- 0.339 -- 0.5276 11 -- --
58.7 0.358 11.4 -- -- -- -- -- 0.343 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.66 temperature 20.0 10 > th dose independent rect. 18 11
3 23.85 temperature 20.0 10 > th dose independent rect. 7 22
5 24.20 temperature 20.0 10 > th dose independent rect. 20 9
10 24.66 temperature 15.0 10 > th dose dependent rect. 20 9
11 24.70 temperature 20.0 270 > th dose independent rect. 18 8
12 24.72 temperature 10.0 30 > th dose dependent rect. 18 11
20 24.94 temperature 20.0 10 > th dose independent rect. 22 7
26 25.01 temperature 10.0 10 > th dose dependent rect. 7 22
45 25.33 humidity 70.0 10 > th dose independent rect. 18 11
56 25.44 temperature 15.0 270 > th dose dependent rect. 18 8
58 25.45 radiation 1.0 10 < th dose dependent rect. 18 22
61 25.48 temperature 15.0 10 > th dose dependent rect. 22 7
63 25.48 radiation 1.0 10 < th dose dependent rect. 18 18
73 25.54 atmosphere 995.0 10 > th dose dependent rect. 5 13
75 25.56 radiation 1.0 10 < th dose dependent rect. 18 14
83 25.58 radiation 1.0 10 < th dose dependent rect. 18 12
87 25.62 temperature 30.0 10 < th dose independent rect. 18 11
88 25.62 temperature 20.0 90 > th dose independent rect. 9 19
89 25.63 temperature 20.0 10 > th dose independent rect. 11 18
96 25.68 temperature 20.0 90 > th dose independent rect. 18 22
100 25.70 humidity 50.0 10 > th dose dependent rect. 18 11
101 25.71 radiation 10.0 1440 < th dose independent rect. 17 1
109 25.77 temperature 20.0 270 > th dose independent rect. 18 18
119 25.81 radiation 1.0 10 < th dose independent rect. 18 22
120 25.82 radiation 10.0 1440 < th dose independent rect. 17 9
121 25.82 radiation 10.0 1440 < th dose independent rect. 17 11
122 25.83 humidity 60.0 720 > th dose independent rect. 17 2
129 25.85 radiation 10.0 1440 < th dose independent rect. 17 3
132 25.85 radiation 1.0 10 < th dose independent rect. 18 11
137 25.86 radiation 10.0 1440 < th dose independent rect. 17 5
139 25.86 radiation 1.0 10 < th dose independent rect. 18 18
143 25.87 radiation 1.0 10 > th dose independent rect. 16 15
160 25.91 atmosphere 1015.0 10 < th dose independent rect. 18 11
166 25.94 radiation 1.0 10 < th dose independent rect. 18 14
173 25.95 temperature 20.0 30 > th dose independent rect. 18 18
193 26.01 wind 9.0 10 < th dose independent rect. 7 22
197 26.02 atmosphere 1015.0 10 < th dose independent rect. 7 22
202 26.03 radiation 1.0 10 < th dose dependent sin 11 NA
220 26.08 humidity 80.0 720 < th dose dependent rect. 19 9
223 26.09 radiation 10.0 1440 > th dose independent rect. 17 13
224 26.09 temperature 20.0 30 > th dose independent rect. 20 16
238 26.11 radiation 10.0 1440 > th dose independent rect. 17 1
251 26.11 temperature 20.0 30 > th dose independent rect. 22 14
253 26.12 wind 9.0 10 < th dose independent rect. 18 11
254 26.12 temperature 10.0 10 > th dose independent rect. 18 11
256 26.12 atmosphere 995.0 10 > th dose independent rect. 18 11
257 26.12 radiation 20.0 10 < th dose independent rect. 18 11
260 26.12 temperature 10.0 10 > th dose independent rect. 5 13
262 26.12 atmosphere 1015.0 10 < th dose independent rect. 5 13
268 26.13 atmosphere 1000.0 10 > th dose independent rect. 5 13
274 26.14 radiation 1.0 10 > th dose independent rect. 5 2
285 26.14 precipitation 0.1 10 < th dose independent rect. 5 13
287 26.14 temperature 10.0 10 > th dose dependent rect. 5 2
289 26.14 precipitation 0.1 10 < th dose dependent rect. 5 13
299 26.18 wind 7.0 10 < th dose independent rect. 5 2
301 26.18 temperature 10.0 10 > th dose independent rect. 5 2
303 26.18 temperature 30.0 10 < th dose independent rect. 5 2
304 26.18 humidity 50.0 10 > th dose independent rect. 5 2
307 26.18 atmosphere 995.0 10 > th dose independent rect. 5 2
308 26.18 atmosphere 1015.0 10 < th dose independent rect. 5 2
309 26.18 radiation 20.0 10 < th dose independent rect. 5 2
312 26.18 precipitation 0.1 10 < th dose independent rect. 5 2
315 26.18 wind 9.0 10 < th dose dependent rect. 5 2
316 26.18 atmosphere 995.0 10 > th dose dependent rect. 5 2
317 26.18 precipitation 0.1 10 < th dose dependent rect. 5 2
361 26.25 radiation 40.0 10 < th dose dependent rect. 5 2
384 26.29 humidity 50.0 10 > th dose dependent rect. 5 2
389 26.29 radiation 1.0 10 < th dose dependent rect. 15 21
398 26.31 radiation 1.0 10 > th dose independent sin 11 NA
399 26.31 radiation 1.0 10 < th dose independent sin 11 NA
400 26.31 humidity 70.0 1440 < th dose independent rect. 15 3
406 26.32 precipitation 0.1 10 < th dose independent rect. 18 11
410 26.32 precipitation 0.1 10 < th dose dependent rect. 18 11
419 26.33 radiation 1.0 10 < th dose dependent rect. 7 23
434 26.35 humidity 70.0 1440 < th dose independent rect. 12 6
436 26.35 radiation 1.0 10 < th dose dependent no NA NA
440 26.35 radiation 1.0 10 < th dose dependent rect. 11 19
474 26.38 temperature 30.0 90 < th dose dependent rect. 16 15
480 26.39 temperature 25.0 90 < th dose independent rect. 16 15
481 26.39 temperature 25.0 90 < th dose independent rect. 16 17
487 26.39 radiation 1.0 10 < th dose dependent rect. 15 15
501 26.40 radiation 1.0 10 > th dose independent rect. 12 19
549 26.42 humidity 80.0 720 < th dose dependent rect. 19 1
558 26.43 humidity 70.0 1440 > th dose independent rect. 12 7
559 26.43 humidity 80.0 1440 < th dose dependent sin 12 NA
561 26.44 humidity 70.0 1440 > th dose independent rect. 14 5
578 26.45 humidity 70.0 1440 > th dose independent rect. 12 17
602 26.46 radiation 10.0 1440 > th dose dependent rect. 17 1
618 26.47 humidity 70.0 1440 > th dose independent rect. 15 3
638 26.48 humidity 70.0 1440 > th dose independent sin 15 NA
659 26.48 atmosphere 995.0 10 > th dose independent rect. 7 22
682 26.49 wind 9.0 10 < th dose independent rect. 5 13
700 26.49 temperature 20.0 10 > th dose independent rect. 20 20
735 26.50 humidity 80.0 1440 < th dose dependent rect. 15 17
762 26.51 precipitation 0.1 10 < th dose independent rect. 7 22
770 26.51 precipitation 0.1 10 < th dose dependent rect. 7 22
786 26.52 humidity 80.0 1440 < th dose dependent rect. 15 14
796 26.52 temperature 15.0 30 > th dose dependent rect. 18 22
828 26.54 humidity 50.0 720 > th dose dependent rect. 17 2
838 26.55 wind 3.0 43200 < th dose dependent rect. 4 2
865 26.57 temperature 20.0 270 < th dose independent rect. 18 10
866 26.57 temperature 25.0 270 < th dose independent rect. 21 10
881 26.58 humidity 70.0 1440 < th dose independent sin 17 NA
894 26.58 temperature 20.0 10 > th dose independent rect. 15 14
933 26.59 temperature 30.0 270 < th dose dependent rect. 21 10
936 26.59 temperature 30.0 90 < th dose dependent rect. 19 12
951 26.60 temperature 20.0 270 > th dose independent sin 13 NA
958 26.60 radiation 1.0 10 > th dose independent rect. 14 17
965 26.60 temperature 15.0 30 > th dose dependent rect. 22 14
978 26.61 temperature 25.0 270 < th dose independent rect. 1 6