Os03g0761700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heat shock protein DnaJ family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0761700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Heat shock protein DnaJ family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.96 | 0.345 | 8.16 | -0.654 | 0.00669 | -0.881 | 0.775 | -1.03 | -0.0585 | 0.722 | 25.1 | 79 | -- | -- |
| 55.23 | 0.346 | 8.18 | -0.814 | 0.00716 | -0.78 | -0.484 | -- | -0.0975 | 12 | 25.87 | 113 | -- | -- |
| 55.94 | 0.348 | 8.17 | -0.762 | 0.00123 | -0.827 | -- | -0.459 | -0.0768 | 0.288 | 25.06 | 70 | -- | -- |
| 56.07 | 0.349 | 8.18 | -0.843 | 0.047 | -0.784 | -- | -- | -0.101 | 12.8 | 25.2 | 189 | -- | -- |
| 55.94 | 0.348 | 8.17 | -0.766 | -- | -0.828 | -- | -0.453 | -0.0779 | -- | 25.04 | 70 | -- | -- |
| 64.29 | 0.376 | 8.14 | -0.628 | 0.162 | -- | -0.449 | -- | 0.067 | 13.6 | -- | -- | -- | -- |
| 65.05 | 0.378 | 8.14 | -0.642 | 0.167 | -- | -- | -- | 0.0649 | 14.3 | -- | -- | -- | -- |
| 56.17 | 0.349 | 8.18 | -0.845 | -- | -0.804 | -- | -- | -0.101 | -- | 25.31 | 180 | -- | -- |
| 72.57 | 0.399 | 8.14 | -- | 0.0942 | -0.45 | -- | -- | 0.0582 | 15.4 | 25.14 | 66 | -- | -- |
| 66.69 | 0.382 | 8.14 | -0.649 | -- | -- | -- | -- | 0.0609 | -- | -- | -- | -- | -- |
| 75.9 | 0.408 | 8.13 | -- | 0.179 | -- | -- | -- | 0.136 | 14.4 | -- | -- | -- | -- |
| 73.02 | 0.399 | 8.15 | -- | -- | -0.501 | -- | -- | 0.0474 | -- | 25.14 | 66 | -- | -- |
| 77.8 | 0.412 | 8.13 | -- | -- | -- | -- | -- | 0.133 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.17 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 4 | 49.85 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 7 | 50.05 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 16 | 15 |
| 227 | 52.35 | temperature | 20.0 | 30 | > th | dose independent | rect. | 21 | 8 |
| 237 | 52.46 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 253 | 52.59 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 6 |
| 258 | 52.66 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 3 |
| 261 | 52.68 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 271 | 52.76 | temperature | 20.0 | 90 | < th | dose independent | rect. | 15 | 15 |
| 274 | 52.78 | temperature | 20.0 | 10 | < th | dose independent | rect. | 15 | 16 |
| 281 | 52.82 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 6 |
| 320 | 53.07 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 332 | 53.11 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 9 |
| 335 | 53.13 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 337 | 53.15 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 338 | 53.15 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 341 | 53.16 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 350 | 53.21 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 352 | 53.22 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 3 |
| 365 | 53.27 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 380 | 53.32 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 388 | 53.34 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 391 | 53.35 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 392 | 53.36 | wind | 7.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 395 | 53.36 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 21 | 12 |
| 404 | 53.39 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 412 | 53.40 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 10 |
| 414 | 53.41 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 8 |
| 419 | 53.43 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 431 | 53.47 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 472 | 53.54 | temperature | 25.0 | 720 | < th | dose dependent | sin | 18 | NA |
| 491 | 53.57 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 2 | 7 |
| 499 | 53.58 | temperature | 25.0 | 270 | < th | dose dependent | sin | 13 | NA |
| 516 | 53.61 | wind | 9.0 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 517 | 53.61 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 14 | NA |
| 532 | 53.63 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 575 | 53.72 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 2 |
| 608 | 53.77 | wind | 7.0 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 628 | 53.80 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 9 | 4 |
| 659 | 53.86 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 692 | 53.90 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 2 | 3 |
| 708 | 53.92 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 719 | 53.93 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 7 |
| 722 | 53.94 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 726 | 53.94 | temperature | 10.0 | 270 | > th | dose dependent | sin | 11 | NA |
| 809 | 54.01 | temperature | 25.0 | 90 | < th | dose dependent | no | NA | NA |
| 836 | 54.03 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 10 |
| 843 | 54.04 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 875 | 54.06 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 893 | 54.08 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 5 |
| 902 | 54.09 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 917 | 54.10 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 929 | 54.12 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 946 | 54.13 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 959 | 54.14 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 15 | 16 |
| 970 | 54.14 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 973 | 54.15 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 985 | 54.16 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |