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Os03g0760100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.94 (0.0263) R2 : 0.791
β1 : 1.47 (0.0966) R2dD : 0.112 R2D : 0.109
β2 : 3.25 (0.0861) R2dC : 1.04 R2C : 0.488
β3 : 1.78 (0.108) R2dE : 0.195 R2E : -0.385
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.243 (0.0564) R2dN8 : 0.0126 R2N8 : 0.00641
σ : 0.492
deviance : 111.63
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C
peak time of C : 6.72
E
wheather : temperature
threshold : 28.65
memory length : 310
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 14.9
open length of G : 5.82

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
105.41 0.482 7.94 1.39 3.21 1.81 0.686 2.14 -0.252 6.72 28.7 308 14.9 5.77
111.37 0.492 7.94 1.63 3.26 1.91 -0.405 -- -0.239 6.65 28.6 328 14.5 5.89
106.03 0.48 7.94 1.42 3.21 1.8 -- 1.7 -0.241 6.71 28.69 309 15 5.73
111.63 0.492 7.94 1.47 3.25 1.78 -- -- -0.243 6.72 28.65 310 14.9 5.82
246.17 0.731 7.92 0.635 -- 1.98 -- 2.05 -0.0526 -- 34.71 1207 15.8 5.57
158.93 0.591 7.94 1.34 2.46 -- 0.357 -- -0.166 5.9 -- -- -- --
159.24 0.591 7.94 1.35 2.46 -- -- -- -0.167 5.92 -- -- -- --
159.85 0.589 8.05 1.44 -- 2.51 -- -- -0.222 -- 53.73 936 17.4 9.68
168.75 0.605 7.96 -- 3.27 1.6 -- -- -0.389 6.69 29 296 15.1 6.03
474.03 1.02 7.98 1.42 -- -- -- -- -0.11 -- -- -- -- --
207.07 0.673 7.98 -- 2.48 -- -- -- -0.317 5.89 -- -- -- --
198.7 0.657 8.03 -- -- 2.84 -- -- -0.321 -- 59.44 770 17.4 12
527.29 1.07 8.02 -- -- -- -- -- -0.268 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 108.98 temperature 10 270 > th dose dependent rect. 12 14
9 112.33 temperature 30 270 < th dose independent rect. 15 6
11 113.34 temperature 10 270 > th dose dependent sin 20 NA
22 114.71 humidity 70 270 > th dose independent rect. 15 6
24 114.96 humidity 50 270 > th dose dependent rect. 15 6
36 115.98 temperature 30 270 < th dose dependent rect. 15 6
49 116.91 temperature 10 720 > th dose dependent rect. 6 11
52 117.07 temperature 30 90 < th dose dependent rect. 11 12
53 117.13 temperature 10 270 > th dose dependent rect. 20 22
65 117.71 temperature 30 270 < th dose dependent rect. 8 13
88 118.47 temperature 15 270 > th dose dependent rect. 8 10
93 118.68 temperature 30 270 < th dose independent rect. 7 14
97 118.78 humidity 70 270 > th dose independent rect. 17 3
132 119.55 temperature 10 720 > th dose dependent rect. 12 6
134 119.59 radiation 10 270 < th dose dependent rect. 15 6
152 119.83 atmosphere 1005 270 > th dose independent rect. 16 5
165 120.15 temperature 30 90 < th dose dependent sin 19 NA
174 120.33 temperature 30 270 < th dose dependent rect. 4 17
180 120.49 radiation 1 270 < th dose independent rect. 7 14
185 120.59 radiation 1 90 > th dose independent sin 19 NA
200 120.74 radiation 10 270 < th dose dependent rect. 8 13
237 121.32 radiation 1 270 < th dose independent rect. 15 6
242 121.39 temperature 30 270 < th dose independent rect. 15 20
245 121.40 radiation 1 90 < th dose independent sin 18 NA
246 121.41 temperature 30 270 < th dose independent rect. 16 17
247 121.46 radiation 10 270 < th dose dependent rect. 10 11
260 121.54 radiation 1 90 < th dose dependent sin 18 NA
262 121.55 radiation 1 270 > th dose independent sin 22 NA
275 121.66 temperature 30 270 < th dose dependent sin 22 NA
276 121.66 temperature 15 270 > th dose dependent rect. 10 21
298 121.88 atmosphere 1005 270 > th dose dependent rect. 16 4
311 122.03 temperature 15 90 > th dose dependent rect. 23 20
350 122.40 radiation 1 270 < th dose independent sin 22 NA
355 122.46 humidity 70 90 > th dose independent sin 16 NA
388 122.65 temperature 30 270 < th dose independent rect. 16 13
414 122.84 temperature 30 270 < th dose independent rect. 4 17
485 123.34 humidity 50 270 > th dose independent rect. 7 14
522 123.58 radiation 1 270 < th dose dependent sin 23 NA
597 124.02 temperature 30 270 < th dose independent rect. 1 22
605 124.06 temperature 20 270 > th dose dependent rect. 6 20
642 124.26 humidity 50 270 > th dose dependent rect. 15 20
681 124.46 temperature 10 720 > th dose dependent rect. 5 19
771 124.89 humidity 50 270 > th dose dependent rect. 8 13
812 125.07 humidity 50 90 > th dose dependent sin 17 NA
814 125.08 humidity 70 270 > th dose independent rect. 15 18
815 125.08 humidity 60 10 > th dose dependent sin 17 NA
825 125.12 humidity 70 10 > th dose independent sin 15 NA
829 125.15 temperature 30 270 < th dose independent sin 21 NA
881 125.32 temperature 25 270 > th dose dependent no NA NA
910 125.46 atmosphere 1005 270 > th dose independent rect. 17 1
928 125.50 humidity 50 90 > th dose dependent rect. 17 19