Os03g0759000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1336 domain containing protein.
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Os03g0759000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1336 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 107.71 | 0.488 | 8.91 | 0.767 | 1.82 | -1.6 | 0.436 | 7.25 | -0.267 | 16.4 | 29.04 | 1389 | -- | -- |
| 113.32 | 0.496 | 9.03 | -0.61 | 1.79 | -0.818 | 0.204 | -- | -0.18 | 16.4 | 25.57 | 2759 | -- | -- |
| 108.21 | 0.484 | 8.9 | 0.78 | 1.82 | -1.6 | -- | 7.23 | -0.254 | 16.4 | 28.99 | 1392 | -- | -- |
| 113.49 | 0.496 | 9.04 | -0.637 | 1.79 | -0.851 | -- | -- | -0.195 | 16.4 | 25.7 | 2741 | -- | -- |
| 280.51 | 0.78 | 8.89 | 0.756 | -- | -1.85 | -- | 7.1 | -0.261 | -- | 28.56 | 1278 | -- | -- |
| 142.47 | 0.56 | 9.05 | -0.924 | 1.88 | -- | 0.515 | -- | -0.25 | 16.3 | -- | -- | -- | -- |
| 143.19 | 0.56 | 9.05 | -0.918 | 1.88 | -- | -- | -- | -0.248 | 16.2 | -- | -- | -- | -- |
| 279.69 | 0.779 | 9 | -0.552 | -- | -1.19 | -- | -- | -0.107 | -- | 23.6 | 2700 | -- | -- |
| 122.84 | 0.516 | 9.03 | -- | 1.78 | -1.01 | -- | -- | -0.085 | 16.5 | 24.63 | 2749 | -- | -- |
| 334.19 | 0.854 | 9.04 | -0.994 | -- | -- | -- | -- | -0.298 | -- | -- | -- | -- | -- |
| 165.42 | 0.602 | 9.03 | -- | 1.9 | -- | -- | -- | -0.145 | 16.2 | -- | -- | -- | -- |
| 287.01 | 0.789 | 8.98 | -- | -- | -1.32 | -- | -- | -0.0235 | -- | 23.5 | 2704 | -- | -- |
| 360.23 | 0.886 | 9.01 | -- | -- | -- | -- | -- | -0.187 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 105.84 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 16 | 106.44 | radiation | 40 | 14400 | > th | dose independent | rect. | 15 | 17 |
| 33 | 107.94 | temperature | 30 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 34 | 107.97 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 65 | 108.08 | temperature | 30 | 1440 | > th | dose dependent | sin | 14 | NA |
| 94 | 108.28 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 98 | 108.35 | radiation | 30 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 114 | 108.38 | temperature | 30 | 1440 | > th | dose independent | sin | 13 | NA |
| 149 | 108.51 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 152 | 108.54 | temperature | 30 | 1440 | < th | dose independent | sin | 13 | NA |
| 196 | 108.67 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 217 | 108.71 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 309 | 108.72 | temperature | 30 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 332 | 108.91 | temperature | 30 | 1440 | < th | dose independent | rect. | 12 | 23 |
| 338 | 108.99 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 358 | 109.08 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 390 | 109.12 | temperature | 30 | 1440 | < th | dose independent | rect. | 12 | 7 |
| 393 | 109.14 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 394 | 109.14 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 21 |
| 397 | 109.15 | temperature | 30 | 1440 | < th | dose independent | rect. | 12 | 17 |
| 403 | 109.17 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 20 |
| 459 | 109.34 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 465 | 109.35 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 473 | 109.38 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 14 |
| 477 | 109.39 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 498 | 109.42 | temperature | 30 | 1440 | < th | dose independent | rect. | 21 | 22 |
| 553 | 109.48 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 581 | 109.48 | temperature | 25 | 1440 | > th | dose dependent | rect. | 4 | 3 |
| 590 | 109.49 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 23 |
| 637 | 109.57 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 683 | 109.62 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 721 | 109.70 | temperature | 10 | 10 | > th | dose dependent | rect. | 4 | 16 |
| 752 | 109.80 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 753 | 109.81 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 12 |
| 759 | 109.85 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 7 |
| 763 | 109.87 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 882 | 109.92 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 890 | 109.96 | temperature | 25 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 910 | 110.01 | temperature | 25 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 978 | 110.16 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 5 |
| 983 | 110.18 | wind | 1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 996 | 110.22 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 18 |