Os03g0758800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-4D).
FiT-DB / Search/ Help/ Sample detail
|
Os03g0758800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-4D).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.56 | 0.26 | 15.1 | 0.0151 | 0.88 | -0.116 | 0.208 | -2.4 | -0.0371 | 20.8 | 12.31 | 5384 | -- | -- |
| 35.2 | 0.278 | 15 | 0.512 | 0.882 | 0.161 | 0.158 | -- | 0.088 | 20.9 | 10.29 | 9640 | -- | -- |
| 30.68 | 0.258 | 15.1 | 0.0119 | 0.878 | -0.123 | -- | -2.4 | -0.0349 | 20.8 | 11.47 | 5530 | -- | -- |
| 35.29 | 0.278 | 15 | 0.507 | 0.882 | 0.163 | -- | -- | 0.0877 | 20.9 | 11.47 | 5530 | -- | -- |
| 74.33 | 0.402 | 15.1 | 0.000717 | -- | -0.024 | -- | -2.19 | -0.0476 | -- | 11.58 | 4297 | -- | -- |
| 35.45 | 0.279 | 15 | 0.544 | 0.876 | -- | 0.167 | -- | 0.111 | 20.7 | -- | -- | -- | -- |
| 35.54 | 0.279 | 15 | 0.538 | 0.875 | -- | -- | -- | 0.11 | 20.7 | -- | -- | -- | -- |
| 69.54 | 0.388 | 15 | 0.351 | -- | 0.778 | -- | -- | -0.0119 | -- | 3.92 | 629 | -- | -- |
| 38.47 | 0.289 | 15 | -- | 0.861 | 0.364 | -- | -- | -0.0611 | 20.7 | 10.42 | 42741 | -- | -- |
| 78.92 | 0.415 | 15 | 0.537 | -- | -- | -- | -- | 0.103 | -- | -- | -- | -- | -- |
| 43.17 | 0.307 | 15 | -- | 0.874 | -- | -- | -- | 0.0506 | 20.8 | -- | -- | -- | -- |
| 72.48 | 0.397 | 15 | -- | -- | 0.907 | -- | -- | -0.067 | -- | 4.639 | 653 | -- | -- |
| 86.52 | 0.434 | 15 | -- | -- | -- | -- | -- | 0.0439 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.50 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 10 | 7 |
| 3 | 29.81 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 7 | 7 |
| 6 | 29.97 | wind | 1.0 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 8 | 30.01 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 11 | 30.08 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 12 | 30.10 | wind | 1.0 | 43200 | > th | dose independent | rect. | 7 | 18 |
| 14 | 30.11 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 8 | 14 |
| 15 | 30.12 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 16 | 4 |
| 16 | 30.12 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 10 | 11 |
| 23 | 30.13 | temperature | 20.0 | 43200 | > th | dose independent | sin | 20 | NA |
| 27 | 30.13 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 33 | 30.13 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 8 | 14 |
| 34 | 30.13 | wind | 5.0 | 43200 | > th | dose independent | rect. | 23 | 15 |
| 45 | 30.14 | temperature | 20.0 | 43200 | < th | dose independent | sin | 20 | NA |
| 54 | 30.14 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 10 | 12 |
| 63 | 30.14 | wind | 5.0 | 43200 | < th | dose independent | rect. | 23 | 15 |
| 69 | 30.14 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 22 | 14 |
| 73 | 30.15 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 78 | 30.15 | wind | 5.0 | 43200 | > th | dose independent | rect. | 23 | 12 |
| 79 | 30.15 | wind | 5.0 | 43200 | < th | dose independent | rect. | 23 | 12 |
| 110 | 30.16 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 14 | 10 |
| 116 | 30.16 | wind | 1.0 | 43200 | > th | dose independent | rect. | 13 | 13 |
| 185 | 30.18 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 187 | 30.18 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 16 | 3 |
| 228 | 30.20 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 255 | 30.21 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 5 | 3 |
| 268 | 30.22 | wind | 5.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 271 | 30.22 | wind | 7.0 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 301 | 30.23 | wind | 5.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 328 | 30.24 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 343 | 30.24 | wind | 1.0 | 43200 | < th | dose independent | rect. | 7 | 18 |
| 351 | 30.24 | wind | 5.0 | 43200 | > th | dose dependent | sin | 8 | NA |
| 355 | 30.24 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 3 | 8 |
| 362 | 30.25 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 395 | 30.25 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 401 | 30.25 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 17 |
| 403 | 30.26 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 422 | 30.26 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 425 | 30.26 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 8 | 3 |
| 516 | 30.29 | wind | 7.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 523 | 30.29 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 6 | 9 |
| 526 | 30.29 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 6 | 11 |
| 530 | 30.29 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 15 |
| 545 | 30.29 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 576 | 30.30 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 6 | 7 |
| 580 | 30.30 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 6 | 8 |
| 681 | 30.32 | temperature | 20.0 | 43200 | < th | dose independent | no | NA | NA |
| 691 | 30.32 | wind | 1.0 | 43200 | > th | dose independent | rect. | 15 | 11 |
| 723 | 30.33 | temperature | 20.0 | 43200 | > th | dose independent | no | NA | NA |
| 751 | 30.33 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 14 | 22 |
| 765 | 30.33 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 789 | 30.34 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 4 |
| 823 | 30.34 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 11 | 23 |
| 835 | 30.34 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 4 |
| 838 | 30.34 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 21 | 8 |
| 848 | 30.35 | wind | 1.0 | 43200 | > th | dose independent | sin | 18 | NA |
| 936 | 30.36 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 10 |
| 984 | 30.37 | wind | 5.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 1000 | 30.37 | wind | 1.0 | 43200 | < th | dose independent | rect. | 10 | 15 |