BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0758800 Os03g0758800|AK060387
         (161 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G13950.1  | chr1:4773631-4774668 FORWARD LENGTH=159            284   2e-77
AT1G69410.1  | chr1:26089301-26090194 FORWARD LENGTH=159          283   4e-77
AT1G26630.1  | chr1:9205968-9207098 FORWARD LENGTH=160            265   7e-72

>AT1G13950.1 | chr1:4773631-4774668 FORWARD LENGTH=159
          Length = 158

 Score =  284 bits (726), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 139/160 (86%), Positives = 150/160 (93%), Gaps = 2/160 (1%)

Query: 1   MSDSEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCH 60
           MSD EEHHFES +DAGASKTYPQQAGTIRKNG+IVIKNRPCKVVEVSTSKTGKHGHAKCH
Sbjct: 1   MSD-EEHHFES-SDAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCH 58

Query: 61  FVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGGTKDDLRLPS 120
           FVAIDIF  KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG+VSLLT++G TKDDL+LP+
Sbjct: 59  FVAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGYVSLLTDNGSTKDDLKLPN 118

Query: 121 DEALLTQIKDGFAEGKDLIVTVMSAMGEEQICALKDIGPK 160
           D+ LL QIK GF +GKDL+V+VMSAMGEEQI ALKDIGPK
Sbjct: 119 DDTLLQQIKSGFDDGKDLVVSVMSAMGEEQINALKDIGPK 158



>AT1G69410.1 | chr1:26089301-26090194 FORWARD LENGTH=159
          Length = 158

 Score =  283 bits (723), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 136/160 (85%), Positives = 150/160 (93%), Gaps = 2/160 (1%)

Query: 1   MSDSEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCH 60
           MSD +EHHFES +DAGASKTYPQQAG IRK GHIVIK RPCKVVEVSTSKTGKHGHAKCH
Sbjct: 1   MSD-DEHHFES-SDAGASKTYPQQAGNIRKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCH 58

Query: 61  FVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGGTKDDLRLPS 120
           FVAIDIF  KKLEDIVPSSHNCDVPHVNR DYQLIDISEDGFVSLLT++G TKDDL+LP+
Sbjct: 59  FVAIDIFTSKKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPT 118

Query: 121 DEALLTQIKDGFAEGKDLIVTVMSAMGEEQICALKDIGPK 160
           DEALLTQ+K+GF EGKD++V+VMSAMGEEQ+CALK++GPK
Sbjct: 119 DEALLTQLKNGFEEGKDIVVSVMSAMGEEQMCALKEVGPK 158



>AT1G26630.1 | chr1:9205968-9207098 FORWARD LENGTH=160
          Length = 159

 Score =  265 bits (677), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 126/158 (79%), Positives = 145/158 (91%), Gaps = 2/158 (1%)

Query: 1   MSDSEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCH 60
           MSD +EHHFE+ +++GASKTYPQ AG IRK GHIVIKNRPCKVVEVSTSKTGKHGHAKCH
Sbjct: 1   MSD-DEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCH 58

Query: 61  FVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGGTKDDLRLPS 120
           FVAIDIF  KKLEDIVPSSHNCDVPHVNR DYQLIDI+EDGFVSLLT+SGGTKDDL+LP+
Sbjct: 59  FVAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPT 118

Query: 121 DEALLTQIKDGFAEGKDLIVTVMSAMGEEQICALKDIG 158
           D+ L  Q++ GF EGKD++V+VMS+MGEEQICA+K++G
Sbjct: 119 DDGLTAQMRLGFDEGKDIVVSVMSSMGEEQICAVKEVG 156



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.314    0.133    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,665,095
Number of extensions: 150322
Number of successful extensions: 246
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 246
Number of HSP's successfully gapped: 3
Length of query: 161
Length of database: 11,106,569
Length adjustment: 91
Effective length of query: 70
Effective length of database: 8,611,713
Effective search space: 602819910
Effective search space used: 602819910
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 107 (45.8 bits)