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Os03g0758600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF863, plant family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.8 (0.0154) R2 : 0.496
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.751 (0.0367) R2dC : 0.465 R2C : 0.458
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.168 (0.0324) R2dN8 : 0.0382 R2N8 : 0.0306
σ : 0.291
deviance : 38.62
__
_____
C
peak time of C : 11.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
30.89 0.261 12.9 -0.707 0.718 -0.645 -0.31 3.61 -0.204 11.8 30.1 5805 -- --
35.47 0.277 12.8 -0.13 0.759 -0.31 -0.408 -- -0.299 11.7 23.6 47520 -- --
31.24 0.26 12.9 -0.703 0.713 -0.66 -- 3.71 -0.196 11.8 30.3 5844 -- --
35.25 0.277 12.8 -0.424 0.763 -0.543 -- -- -0.351 11.8 18.79 47520 -- --
61.61 0.366 13 -1.06 -- -0.847 -- 5.57 -0.274 -- 30.4 5910 -- --
37 0.285 12.8 0.193 0.752 -- -0.428 -- -0.146 11.7 -- -- -- --
37.79 0.288 12.8 0.177 0.754 -- -- -- -0.148 11.7 -- -- -- --
64.77 0.376 12.8 0.0798 -- -0.342 -- -- -0.173 -- 28.3 5952 -- --
36.19 0.28 12.8 -- 0.758 -0.262 -- -- -0.223 11.8 17.68 47520 -- --
73.52 0.401 12.8 0.155 -- -- -- -- -0.157 -- -- -- -- --
38.62 0.291 12.8 -- 0.751 -- -- -- -0.168 11.7 -- -- -- --
63.81 0.373 12.8 -- -- -0.358 -- -- -0.177 -- 27.9 5946 -- --
74.15 0.402 12.8 -- -- -- -- -- -0.175 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.63 temperature 30.0 270 < th dose independent rect. 14 14
3 31.13 atmosphere 995.0 270 > th dose dependent rect. 14 14
5 31.21 temperature 10.0 270 > th dose dependent rect. 4 20
6 31.33 atmosphere 995.0 30 > th dose dependent rect. 17 13
7 31.35 humidity 50.0 270 > th dose independent rect. 15 13
15 31.52 radiation 1.0 30 < th dose independent rect. 2 17
16 31.55 atmosphere 1000.0 270 > th dose independent rect. 15 13
20 31.59 temperature 30.0 270 < th dose independent rect. 23 20
21 31.59 radiation 1.0 30 < th dose dependent rect. 2 17
24 31.63 temperature 10.0 10 > th dose dependent rect. 6 20
33 31.77 radiation 10.0 43200 < th dose dependent rect. 20 7
35 31.80 atmosphere 1005.0 720 > th dose independent rect. 17 2
44 31.85 atmosphere 995.0 720 > th dose dependent rect. 17 2
49 31.88 temperature 30.0 720 < th dose independent rect. 15 4
54 31.92 humidity 70.0 90 > th dose independent rect. 17 2
55 31.92 humidity 70.0 90 > th dose independent rect. 15 15
56 31.92 radiation 1.0 43200 < th dose dependent rect. 19 1
61 31.99 temperature 10.0 270 > th dose dependent rect. 19 14
68 32.03 temperature 30.0 90 < th dose independent rect. 17 2
76 32.07 radiation 10.0 43200 < th dose dependent rect. 22 5
94 32.21 humidity 70.0 90 > th dose independent rect. 15 4
95 32.21 atmosphere 1015.0 90 < th dose dependent rect. 19 6
96 32.23 temperature 30.0 270 < th dose independent rect. 13 6
109 32.30 temperature 30.0 720 > th dose independent rect. 15 1
119 32.34 atmosphere 1005.0 270 > th dose dependent rect. 15 4
122 32.35 atmosphere 1015.0 10 < th dose dependent rect. 19 7
130 32.38 radiation 30.0 4320 > th dose independent rect. 15 17
131 32.38 temperature 10.0 720 > th dose dependent rect. 12 4
133 32.39 radiation 10.0 720 < th dose dependent rect. 17 2
138 32.40 atmosphere 1005.0 90 > th dose dependent rect. 17 2
146 32.45 temperature 30.0 10 < th dose dependent rect. 18 1
152 32.47 radiation 30.0 270 < th dose independent rect. 14 14
154 32.48 wind 9.0 270 < th dose independent rect. 4 11
155 32.49 radiation 30.0 4320 < th dose independent rect. 15 1
156 32.49 radiation 20.0 4320 > th dose independent rect. 16 15
170 32.54 atmosphere 1000.0 10 > th dose dependent rect. 1 5
184 32.59 temperature 30.0 270 < th dose independent rect. 11 8
185 32.59 wind 9.0 10 < th dose independent rect. 19 23
187 32.59 radiation 20.0 4320 > th dose dependent rect. 16 15
193 32.61 radiation 30.0 4320 < th dose independent rect. 15 16
203 32.65 temperature 30.0 270 < th dose independent rect. 9 10
211 32.67 temperature 30.0 720 < th dose independent rect. 7 12
230 32.69 temperature 30.0 720 < th dose independent rect. 7 21
240 32.71 radiation 20.0 4320 > th dose independent rect. 16 1
280 32.73 radiation 20.0 720 < th dose independent rect. 16 3
281 32.73 humidity 50.0 270 > th dose independent rect. 4 11
287 32.74 humidity 50.0 270 > th dose independent rect. 22 22
288 32.74 temperature 30.0 720 > th dose dependent rect. 14 1
289 32.74 radiation 20.0 4320 > th dose dependent rect. 16 1
312 32.76 temperature 30.0 720 > th dose independent rect. 12 5
315 32.76 radiation 30.0 720 < th dose dependent rect. 16 3
316 32.77 humidity 80.0 30 < th dose dependent rect. 18 1
318 32.78 precipitation 0.1 270 < th dose independent rect. 4 11
322 32.78 temperature 25.0 4320 > th dose dependent rect. 7 1
325 32.78 precipitation 0.1 270 < th dose dependent rect. 4 11
339 32.81 wind 5.0 30 > th dose independent rect. 18 1
348 32.81 temperature 30.0 10 < th dose dependent rect. 1 19
356 32.83 temperature 10.0 270 > th dose independent rect. 4 11
358 32.83 atmosphere 1015.0 270 < th dose independent rect. 4 11
359 32.83 temperature 10.0 270 > th dose independent rect. 15 13
361 32.83 radiation 30.0 90 < th dose dependent rect. 15 14
364 32.83 temperature 30.0 90 < th dose dependent rect. 1 18
378 32.85 wind 3.0 10 > th dose dependent rect. 18 1
379 32.85 humidity 70.0 10 > th dose dependent rect. 18 1
380 32.85 atmosphere 995.0 270 > th dose dependent rect. 1 2
392 32.86 humidity 60.0 90 > th dose dependent rect. 17 2
406 32.88 atmosphere 995.0 720 > th dose independent rect. 16 3
418 32.89 temperature 25.0 4320 > th dose dependent rect. 24 9
422 32.90 humidity 70.0 10 > th dose independent rect. 18 1
435 32.90 temperature 25.0 4320 > th dose dependent rect. 23 14
436 32.90 radiation 20.0 30 < th dose dependent rect. 14 16
442 32.91 temperature 30.0 720 < th dose independent rect. 7 5
450 32.91 radiation 20.0 4320 > th dose dependent rect. 15 17
458 32.93 temperature 30.0 10 < th dose independent rect. 18 1
459 32.93 radiation 1.0 30 < th dose independent rect. 15 4
462 32.93 radiation 1.0 30 > th dose independent rect. 6 13
493 32.95 precipitation 0.1 720 < th dose independent rect. 19 14
500 32.95 precipitation 0.1 720 < th dose dependent rect. 19 14
502 32.96 atmosphere 995.0 270 > th dose independent rect. 4 11
504 32.96 precipitation 0.1 270 < th dose independent rect. 15 13
513 32.96 precipitation 0.1 270 < th dose dependent rect. 15 13
517 32.97 radiation 1.0 30 > th dose independent sin 1 NA
524 32.97 atmosphere 1005.0 10 > th dose dependent rect. 17 2
546 32.99 atmosphere 1000.0 270 > th dose independent rect. 22 23
555 33.00 atmosphere 1015.0 270 < th dose dependent rect. 21 1
561 33.00 radiation 10.0 30 < th dose dependent rect. 14 20
564 33.01 humidity 50.0 270 > th dose independent rect. 9 10
565 33.01 precipitation 0.1 720 < th dose independent rect. 21 10
580 33.01 precipitation 0.1 720 < th dose dependent rect. 21 10
629 33.03 temperature 25.0 4320 > th dose dependent rect. 7 6
643 33.04 precipitation 0.1 720 < th dose independent rect. 19 21
645 33.04 temperature 25.0 4320 > th dose dependent sin 6 NA
658 33.04 precipitation 0.1 720 < th dose dependent rect. 19 21
673 33.06 radiation 20.0 720 > th dose independent rect. 16 15
684 33.06 radiation 10.0 30 < th dose dependent rect. 22 23
685 33.07 atmosphere 1000.0 270 > th dose independent rect. 1 2
690 33.07 radiation 30.0 720 > th dose independent rect. 15 17
692 33.07 wind 9.0 270 < th dose independent rect. 3 22
694 33.07 temperature 25.0 4320 > th dose dependent rect. 12 1
706 33.08 humidity 50.0 90 > th dose independent rect. 1 18
711 33.08 temperature 30.0 270 < th dose dependent rect. 1 2
755 33.10 temperature 30.0 720 < th dose independent rect. 15 21
785 33.12 atmosphere 1005.0 30 > th dose independent rect. 1 5
789 33.12 atmosphere 995.0 720 > th dose independent rect. 24 19
790 33.12 wind 7.0 30 < th dose independent rect. 6 20
791 33.12 radiation 1.0 30 < th dose dependent sin 1 NA
804 33.13 radiation 20.0 720 > th dose independent rect. 16 1
817 33.13 wind 9.0 270 < th dose independent rect. 15 13
838 33.14 temperature 25.0 4320 > th dose independent rect. 2 1
844 33.14 atmosphere 995.0 720 > th dose independent rect. 7 21
859 33.15 temperature 30.0 720 > th dose independent rect. 12 1
860 33.15 temperature 30.0 4320 < th dose independent rect. 15 3
881 33.16 humidity 50.0 720 > th dose independent rect. 16 3
907 33.16 radiation 1.0 30 < th dose dependent rect. 15 4
922 33.17 radiation 1.0 30 < th dose independent rect. 6 13
936 33.17 radiation 1.0 270 < th dose dependent rect. 22 21
960 33.19 radiation 1.0 30 < th dose independent sin 1 NA
971 33.19 atmosphere 1010.0 10 < th dose dependent rect. 18 1
974 33.19 temperature 25.0 10 > th dose dependent rect. 18 6
980 33.19 humidity 50.0 90 > th dose dependent rect. 16 13
981 33.19 temperature 25.0 90 > th dose dependent rect. 17 14
988 33.20 atmosphere 995.0 270 > th dose independent rect. 8 11
991 33.20 radiation 1.0 90 > th dose independent rect. 18 23