BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0758600 Os03g0758600|AK062223
         (661 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G26620.1  | chr1:9195838-9198719 REVERSE LENGTH=868             72   7e-13
AT1G13940.1  | chr1:4762703-4765923 REVERSE LENGTH=1006            70   3e-12
AT1G69360.1  | chr1:26072520-26075420 REVERSE LENGTH=897           70   3e-12

>AT1G26620.1 | chr1:9195838-9198719 REVERSE LENGTH=868
          Length = 867

 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 40/261 (15%)

Query: 346 KSSAPVRNFIDLNDDAPNEDNXXXXXXXXXXXXXXLQNNHGKRKFVIDLEVPAC----EE 401
           K +A  R++IDLN  A NED+                    K +  IDLE P      EE
Sbjct: 554 KKAANFRHYIDLNSCA-NEDDEDSGFLSSLSVKT-------KARTWIDLEAPPTLESEEE 605

Query: 402 GVAWDFNQECSPSGKLDVTQEAD-DAHFTCTKIAAESIIALSM----------HVPTIAE 450
           G   D +Q+ +      + Q  D ++     K+AAE+I+A+SM             +   
Sbjct: 606 G---DNSQDKTNEETWRMMQGQDGNSMNELIKVAAEAIVAISMAGHQRHPDDAASSSTDA 662

Query: 451 TPDDMLQWFADLALSSTDDHVEQA-----EAHDCVNNSSDDG---LDSFESLTLKLEETK 502
                L WFA++ ++S  D +E+      EA D   N  D     +D FE++TL ++ETK
Sbjct: 663 ASKSPLSWFAEI-ITSCGDELERKIDGSPEATDFEGNREDYSSGEIDYFEAMTLNIQETK 721

Query: 503 IDEYWSRPQAPEIPNDEQAGLSVNLLTXXXXXXXXXXXXXXXXXXDILPGLTSLARPEII 562
            ++Y   P  PE    E        +                   D LPGL+SL+R E+ 
Sbjct: 722 EEDYMPEPLVPENLKFEDT-----CINKPRRGQARRGRPKRDFQRDTLPGLSSLSRHEVT 776

Query: 563 EDIQLLEGLVQASGGSWQSSL 583
           EDIQ+  GL++    +W S L
Sbjct: 777 EDIQMFGGLMKTGDYTWSSGL 797



>AT1G13940.1 | chr1:4762703-4765923 REVERSE LENGTH=1006
          Length = 1005

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 9/157 (5%)

Query: 432 KIAAESIIA-----LSMHVPTIAETPDD---MLQWFADLALSSTDDHVEQAEAHDCVNNS 483
           K+AAE+I+A     L   V  +A +      +L WFA+   +  ++  ++ +      + 
Sbjct: 749 KLAAETIVAIYSACLDREVEVVASSEVSETIILHWFAETVNTHKENLDKKLDTFSRNQSR 808

Query: 484 SDDGLDSFESLTLKLEETKIDEYWSRPQAPE-IPNDEQAGLSVNLLTXXXXXXXXXXXXX 542
           S + +D FES+TL+L +    EY  +P  PE +  +E  G ++                 
Sbjct: 809 SIEDIDYFESMTLQLPDISEQEYMPKPLVPENLKLEETTGTALVTSQRPRRGNARKGKQR 868

Query: 543 XXXXXDILPGLTSLARPEIIEDIQLLEGLVQASGGSW 579
                DILPGL SL++ E+ EDIQ+ +G ++A+G SW
Sbjct: 869 RDFQRDILPGLLSLSKHEVTEDIQMFDGFMRATGRSW 905



>AT1G69360.1 | chr1:26072520-26075420 REVERSE LENGTH=897
          Length = 896

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 89/236 (37%), Gaps = 26/236 (11%)

Query: 422 EADDAHFTCTKIAAESI--IALSMHVPTIAETP--------DDMLQWFADLALSSTDDH- 470
           EA D+     + AAE+I  I+LS H     E           + L WF +   S  +D  
Sbjct: 648 EAGDSVDELIEAAAEAIVTISLSYHCRNTDEAASSSTDAVDKEPLSWFVNTIASCGNDLE 707

Query: 471 ------VEQAEAHDCVNNSSDDGLDSFESLTLKLEETKIDEYWSRPQAPEIPNDEQAGLS 524
                 +E  +   C    S    D FE++TL L +TK ++Y  +P  PE    +  G  
Sbjct: 708 SKIDACLEARDCEGCREECSSGEFDYFEAMTLNLTQTKEEDYMPKPLIPEYLKFDGTGSM 767

Query: 525 VNLLTXXXXXXXXXXXXXXXXXXDILPGLTSLARPEIIEDIQLLEGLVQASGGSWQSSLT 584
                                  DILPGL SL+R E+ ED+Q+  GL++A+G +W S + 
Sbjct: 768 GITSNRPRRGQARRGRPKRDFQRDILPGLASLSRLEVTEDLQMFGGLMKATGYNWNSGMA 827

Query: 585 XXXXXXXXXXXXXXXXNLSETIEEEEVPVSXXXXXXXXXXXXXEIEASDRGIIGWG 640
                            L   I  +  PV               +   DR + GWG
Sbjct: 828 -------RRSSNRGRKRLVSNI--DRAPVCSSLAQPMNNSSVQMVGLEDRSLTGWG 874



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.312    0.129    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,600,588
Number of extensions: 561855
Number of successful extensions: 1104
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1100
Number of HSP's successfully gapped: 3
Length of query: 661
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 556
Effective length of database: 8,227,889
Effective search space: 4574706284
Effective search space used: 4574706284
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 115 (48.9 bits)