Os03g0752300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to K+ channel protein.
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Os03g0752300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to K+ channel protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.11 | 0.489 | 12.2 | -1.21 | 3.06 | 1.33 | 1.31 | -1.99 | -0.259 | 5.56 | 25 | 1229 | -- | -- |
| 113.15 | 0.495 | 12.2 | -0.731 | 3.07 | 1.06 | 1.17 | -- | -0.146 | 5.51 | 24.13 | 2691 | -- | -- |
| 112.32 | 0.494 | 12.2 | -1.16 | 3.07 | 1.32 | -- | -1.8 | -0.254 | 5.56 | 24.99 | 1224 | -- | -- |
| 116.93 | 0.504 | 12.2 | -0.687 | 3.08 | 1.03 | -- | -- | -0.114 | 5.48 | 24.78 | 2715 | -- | -- |
| 583.23 | 1.13 | 12.1 | 0.185 | -- | -2.1 | -- | 1.34 | 0.254 | -- | 24.99 | 1224 | -- | -- |
| 154.31 | 0.582 | 12.1 | -0.345 | 3.15 | -- | 1.41 | -- | -0.00201 | 5.33 | -- | -- | -- | -- |
| 159.28 | 0.591 | 12.1 | -0.343 | 3.16 | -- | -- | -- | -0.0085 | 5.32 | -- | -- | -- | -- |
| 584.05 | 1.13 | 12.1 | 0.0331 | -- | -2 | -- | -- | 0.213 | -- | 24.99 | 1224 | -- | -- |
| 128.82 | 0.529 | 12.1 | -- | 3.09 | 0.883 | -- | -- | 0.00277 | 5.47 | 25.5 | 2715 | -- | -- |
| 681.19 | 1.22 | 12.2 | -0.235 | -- | -- | -- | -- | 0.0702 | -- | -- | -- | -- | -- |
| 162.39 | 0.596 | 12.1 | -- | 3.16 | -- | -- | -- | 0.0297 | 5.32 | -- | -- | -- | -- |
| 584.08 | 1.13 | 12.1 | -- | -- | -2 | -- | -- | 0.209 | -- | 24.99 | 1224 | -- | -- |
| 682.64 | 1.22 | 12.2 | -- | -- | -- | -- | -- | 0.0962 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 101.80 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 4 | 103.16 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 11 |
| 21 | 105.06 | temperature | 25 | 720 | > th | dose dependent | sin | 12 | NA |
| 44 | 107.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 71 | 109.27 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 5 |
| 83 | 109.78 | humidity | 80 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 91 | 110.00 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 102 | 110.32 | temperature | 25 | 720 | < th | dose independent | rect. | 18 | 5 |
| 103 | 110.36 | temperature | 25 | 720 | > th | dose independent | rect. | 17 | 5 |
| 129 | 110.94 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 130 | 110.94 | humidity | 60 | 720 | > th | dose dependent | rect. | 18 | 6 |
| 134 | 111.00 | temperature | 25 | 720 | < th | dose independent | rect. | 19 | 3 |
| 158 | 111.60 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 190 | 112.22 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 19 |
| 196 | 112.25 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 197 | 112.26 | humidity | 90 | 720 | > th | dose independent | rect. | 21 | 2 |
| 201 | 112.34 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 210 | 112.39 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 271 | 112.77 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 20 |
| 297 | 112.82 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 357 | 112.99 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 10 |
| 369 | 113.02 | temperature | 25 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 377 | 113.04 | temperature | 25 | 1440 | > th | dose dependent | sin | 19 | NA |
| 463 | 113.32 | temperature | 15 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 601 | 113.89 | temperature | 10 | 720 | > th | dose dependent | sin | 16 | NA |
| 620 | 114.00 | temperature | 15 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 630 | 114.05 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 668 | 114.27 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 686 | 114.41 | temperature | 10 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 743 | 114.69 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 747 | 114.73 | temperature | 25 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 796 | 114.87 | humidity | 90 | 720 | > th | dose dependent | rect. | 9 | 15 |
| 833 | 115.04 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 15 |
| 840 | 115.06 | temperature | 20 | 90 | > th | dose dependent | sin | 10 | NA |
| 871 | 115.17 | temperature | 25 | 4320 | > th | dose independent | rect. | 5 | 16 |
| 892 | 115.23 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 18 |
| 915 | 115.29 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 17 |