Os03g0750100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Tetratricopeptide-like helical domain containing protein.
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Os03g0750100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Tetratricopeptide-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.8 | 0.401 | 12.3 | 0.796 | 0.806 | 2.13 | 0.46 | 0.956 | 0.433 | 8.85 | 10.57 | 9 | -- | -- |
| 73.31 | 0.399 | 12.4 | 0.667 | 0.798 | 2.12 | 0.599 | -- | 0.402 | 8.96 | 11.14 | 5 | -- | -- |
| 73.36 | 0.399 | 12.3 | 0.846 | 0.803 | 2.13 | -- | 1.21 | 0.443 | 8.81 | 10.09 | 6 | -- | -- |
| 74.53 | 0.402 | 12.4 | 0.682 | 0.797 | 2.14 | -- | -- | 0.399 | 8.84 | 10.78 | 5 | -- | -- |
| 109.1 | 0.486 | 12.4 | 0.784 | -- | 2.34 | -- | 1.02 | 0.415 | -- | 10.78 | 4 | -- | -- |
| 116.19 | 0.505 | 12.3 | 1.07 | 1.07 | -- | 0.743 | -- | 0.697 | 11.2 | -- | -- | -- | -- |
| 118.54 | 0.51 | 12.3 | 1.1 | 1.07 | -- | -- | -- | 0.7 | 11.1 | -- | -- | -- | -- |
| 109.9 | 0.488 | 12.4 | 0.644 | -- | 2.35 | -- | -- | 0.375 | -- | 11.82 | 3 | -- | -- |
| 85.64 | 0.431 | 12.4 | -- | 0.792 | 2.47 | -- | -- | 0.284 | 8.34 | 10.04 | 5 | -- | -- |
| 190.07 | 0.644 | 12.3 | 1.07 | -- | -- | -- | -- | 0.691 | -- | -- | -- | -- | -- |
| 150.32 | 0.574 | 12.3 | -- | 1.06 | -- | -- | -- | 0.577 | 11.1 | -- | -- | -- | -- |
| 120.21 | 0.511 | 12.4 | -- | -- | 2.55 | -- | -- | 0.28 | -- | 9.696 | 3 | -- | -- |
| 220.42 | 0.693 | 12.3 | -- | -- | -- | -- | -- | 0.572 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.03 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 2 | 65.25 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 19 |
| 6 | 66.33 | temperature | 20 | 90 | > th | dose dependent | sin | 6 | NA |
| 9 | 66.69 | temperature | 10 | 90 | > th | dose dependent | sin | 6 | NA |
| 11 | 66.88 | temperature | 20 | 90 | > th | dose dependent | rect. | 20 | 16 |
| 33 | 67.76 | temperature | 30 | 90 | < th | dose dependent | sin | 5 | NA |
| 51 | 68.53 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 16 |
| 66 | 68.91 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 21 |
| 77 | 69.19 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 124 | 70.54 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 163 | 71.70 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 166 | 71.77 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 183 | 71.97 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 188 | 72.07 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 204 | 72.31 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 217 | 72.43 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 235 | 72.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 236 | 72.88 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 242 | 73.01 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 243 | 73.02 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 253 | 73.21 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 257 | 73.24 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 272 | 73.47 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 278 | 73.56 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 285 | 73.73 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 288 | 73.86 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 334 | 74.75 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 348 | 74.94 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 368 | 75.19 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 23 |
| 378 | 75.29 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 431 | 75.99 | temperature | 25 | 90 | > th | dose independent | rect. | 7 | 20 |
| 447 | 76.17 | temperature | 20 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 508 | 77.01 | temperature | 25 | 270 | > th | dose independent | rect. | 17 | 19 |
| 525 | 77.09 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 21 |
| 633 | 78.27 | temperature | 25 | 90 | < th | dose independent | rect. | 1 | 23 |
| 650 | 78.48 | temperature | 25 | 90 | < th | dose independent | rect. | 23 | 22 |
| 685 | 78.79 | temperature | 25 | 90 | > th | dose independent | rect. | 20 | 18 |
| 696 | 78.87 | temperature | 25 | 90 | < th | dose independent | rect. | 9 | 23 |
| 735 | 79.20 | temperature | 25 | 90 | < th | dose independent | no | NA | NA |
| 748 | 79.30 | temperature | 25 | 90 | < th | dose independent | rect. | 21 | 23 |
| 756 | 79.37 | temperature | 25 | 90 | < th | dose independent | rect. | 13 | 23 |
| 759 | 79.38 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 773 | 79.49 | temperature | 25 | 90 | < th | dose independent | rect. | 15 | 23 |
| 795 | 79.63 | temperature | 25 | 90 | > th | dose independent | rect. | 19 | 23 |
| 816 | 79.82 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 817 | 79.83 | temperature | 25 | 90 | < th | dose independent | rect. | 19 | 23 |
| 845 | 80.05 | temperature | 25 | 90 | > th | dose independent | rect. | 4 | 23 |
| 856 | 80.13 | temperature | 25 | 10 | > th | dose independent | rect. | 7 | 18 |
| 892 | 80.40 | temperature | 25 | 90 | < th | dose independent | rect. | 17 | 23 |
| 937 | 80.64 | temperature | 25 | 90 | > th | dose independent | no | NA | NA |
| 951 | 80.74 | temperature | 20 | 30 | > th | dose dependent | rect. | 7 | 7 |
| 952 | 80.75 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 20 |
| 1000 | 81.04 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |