Os03g0748700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Iron hydrogenase domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0748700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Iron hydrogenase domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 118.15 | 0.511 | 8.69 | -0.902 | 1.5 | 0.947 | 0.945 | -0.397 | -0.104 | 10.2 | 30.3 | 665 | -- | -- |
| 118.16 | 0.506 | 8.69 | -0.868 | 1.5 | 0.907 | 0.951 | -- | -0.104 | 10.2 | 30.39 | 662 | -- | -- |
| 121.64 | 0.514 | 8.69 | -0.862 | 1.49 | 0.921 | -- | -0.432 | -0.106 | 10.1 | 30.4 | 652 | -- | -- |
| 121.68 | 0.514 | 8.69 | -0.82 | 1.48 | 0.868 | -- | -- | -0.105 | 10.1 | 30.44 | 656 | -- | -- |
| 238.25 | 0.723 | 8.75 | -0.888 | -- | 0.699 | -- | -1.77 | -0.15 | -- | 30.39 | 1663 | -- | -- |
| 135.26 | 0.545 | 8.71 | -0.73 | 1.33 | -- | 0.759 | -- | -0.188 | 10.7 | -- | -- | -- | -- |
| 137.62 | 0.549 | 8.71 | -0.7 | 1.33 | -- | -- | -- | -0.187 | 10.6 | -- | -- | -- | -- |
| 231.24 | 0.708 | 8.73 | -0.892 | -- | 0.543 | -- | -- | -0.144 | -- | 30.32 | 5919 | -- | -- |
| 139.02 | 0.549 | 8.67 | -- | 1.47 | 0.806 | -- | -- | -0.0271 | 10.1 | 30.69 | 632 | -- | -- |
| 246.26 | 0.733 | 8.75 | -0.725 | -- | -- | -- | -- | -0.193 | -- | -- | -- | -- | -- |
| 150.53 | 0.574 | 8.69 | -- | 1.33 | -- | -- | -- | -0.109 | 10.7 | -- | -- | -- | -- |
| 251.31 | 0.738 | 8.74 | -- | -- | 0.403 | -- | -- | -0.111 | -- | 30.3 | 5924 | -- | -- |
| 260.12 | 0.753 | 8.73 | -- | -- | -- | -- | -- | -0.113 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 110.86 | humidity | 9e+01 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 2 | 111.02 | humidity | 7e+01 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 12 | 112.05 | humidity | 8e+01 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 16 | 112.20 | humidity | 8e+01 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 29 | 112.37 | humidity | 8e+01 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 33 | 112.52 | humidity | 8e+01 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 34 | 112.55 | humidity | 9e+01 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 68 | 113.19 | humidity | 9e+01 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 79 | 113.29 | humidity | 9e+01 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 89 | 113.38 | humidity | 7e+01 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 150 | 113.99 | humidity | 6e+01 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 171 | 114.13 | precipitation | 1e-01 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 173 | 114.13 | precipitation | 1e-01 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 182 | 114.17 | humidity | 6e+01 | 14400 | > th | dose dependent | rect. | 12 | 7 |
| 188 | 114.20 | humidity | 6e+01 | 14400 | > th | dose dependent | rect. | 12 | 11 |
| 192 | 114.23 | precipitation | 1e-01 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 194 | 114.23 | atmosphere | 1e+03 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 201 | 114.24 | humidity | 9e+01 | 14400 | > th | dose dependent | rect. | 6 | 18 |
| 207 | 114.27 | precipitation | 1e-01 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 256 | 114.46 | wind | 3e+00 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 276 | 114.50 | humidity | 9e+01 | 14400 | > th | dose dependent | sin | 18 | NA |
| 281 | 114.51 | humidity | 6e+01 | 14400 | > th | dose dependent | sin | 17 | NA |
| 300 | 114.54 | humidity | 7e+01 | 14400 | > th | dose dependent | rect. | 7 | 16 |
| 301 | 114.55 | humidity | 8e+01 | 14400 | > th | dose independent | rect. | 6 | 15 |
| 353 | 114.64 | humidity | 7e+01 | 14400 | > th | dose dependent | rect. | 17 | 17 |
| 356 | 114.65 | humidity | 9e+01 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 369 | 114.67 | radiation | 2e+01 | 720 | > th | dose independent | rect. | 16 | 1 |
| 436 | 114.75 | humidity | 6e+01 | 14400 | > th | dose dependent | rect. | 12 | 21 |
| 448 | 114.77 | humidity | 8e+01 | 14400 | < th | dose independent | rect. | 7 | 14 |
| 538 | 114.89 | humidity | 7e+01 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 647 | 114.98 | humidity | 6e+01 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 745 | 115.07 | humidity | 6e+01 | 14400 | > th | dose dependent | no | NA | NA |
| 891 | 115.20 | humidity | 8e+01 | 14400 | > th | dose independent | rect. | 7 | 5 |
| 896 | 115.20 | humidity | 9e+01 | 14400 | < th | dose dependent | rect. | 12 | 7 |
| 953 | 115.26 | humidity | 8e+01 | 43200 | > th | dose independent | rect. | 24 | 1 |