Os03g0748600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0748600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.09 | 0.355 | 9.16 | -1.07 | 0.752 | -0.165 | 0.482 | -3.78 | -0.241 | 20.3 | 29.32 | 1249 | -- | -- |
| 57.92 | 0.354 | 9.09 | -0.395 | 0.771 | -0.587 | 0.403 | -- | -0.221 | 20.1 | 29.56 | 1250 | -- | -- |
| 57.76 | 0.354 | 9.16 | -1.09 | 0.752 | -0.158 | -- | -3.77 | -0.24 | 20.1 | 29.34 | 1251 | -- | -- |
| 58.51 | 0.356 | 9.08 | -0.399 | 0.761 | -0.579 | -- | -- | -0.213 | 20.1 | 29.46 | 1260 | -- | -- |
| 88.33 | 0.438 | 9.15 | -1.13 | -- | -0.135 | -- | -3.71 | -0.256 | -- | 29.08 | 1352 | -- | -- |
| 74.41 | 0.404 | 9.06 | -0.552 | 0.751 | -- | 0.366 | -- | -0.115 | 19.8 | -- | -- | -- | -- |
| 74.78 | 0.405 | 9.06 | -0.56 | 0.752 | -- | -- | -- | -0.114 | 19.7 | -- | -- | -- | -- |
| 85.79 | 0.431 | 9.06 | -0.385 | -- | -0.59 | -- | -- | -0.182 | -- | 29.6 | 5792 | -- | -- |
| 62.5 | 0.368 | 9.07 | -- | 0.757 | -0.638 | -- | -- | -0.156 | 20.1 | 28.86 | 1313 | -- | -- |
| 105.27 | 0.479 | 9.04 | -0.57 | -- | -- | -- | -- | -0.125 | -- | -- | -- | -- | -- |
| 83.06 | 0.426 | 9.05 | -- | 0.757 | -- | -- | -- | -0.0513 | 19.6 | -- | -- | -- | -- |
| 89.39 | 0.44 | 9.05 | -- | -- | -0.679 | -- | -- | -0.144 | -- | 29.21 | 5800 | -- | -- |
| 113.85 | 0.498 | 9.03 | -- | -- | -- | -- | -- | -0.0615 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.84 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 6 | 57.92 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 11 |
| 27 | 58.02 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 7 |
| 32 | 58.04 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 2 |
| 64 | 58.09 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 22 |
| 68 | 58.10 | temperature | 30 | 1440 | > th | dose dependent | sin | 3 | NA |
| 74 | 58.13 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 13 |
| 75 | 58.13 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 20 |
| 102 | 58.18 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 114 | 58.22 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 115 | 58.22 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 169 | 58.25 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 190 | 58.26 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 192 | 58.26 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 289 | 58.28 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 365 | 58.36 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 20 |
| 368 | 58.36 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 371 | 58.37 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 409 | 58.37 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 471 | 58.38 | temperature | 30 | 1440 | < th | dose independent | sin | 10 | NA |
| 473 | 58.38 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 483 | 58.39 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 5 |
| 484 | 58.39 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 8 |
| 488 | 58.40 | temperature | 30 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 510 | 58.43 | temperature | 30 | 1440 | > th | dose independent | sin | 21 | NA |
| 534 | 58.44 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 23 |
| 538 | 58.45 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 542 | 58.45 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 15 |
| 633 | 58.46 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 17 |
| 653 | 58.47 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 13 |
| 661 | 58.48 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 11 |
| 677 | 58.49 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 6 |
| 678 | 58.49 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 9 |
| 693 | 58.50 | temperature | 30 | 1440 | < th | dose independent | sin | 2 | NA |
| 696 | 58.50 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 7 |
| 717 | 58.51 | temperature | 30 | 1440 | < th | dose independent | sin | 0 | NA |
| 772 | 58.53 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 842 | 58.62 | temperature | 30 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 843 | 58.62 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 853 | 58.62 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 859 | 58.62 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 872 | 58.63 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 10 |
| 961 | 58.67 | temperature | 30 | 4320 | > th | dose dependent | rect. | 15 | 3 |
| 992 | 58.68 | temperature | 30 | 1440 | > th | dose independent | sin | 11 | NA |