Os03g0747300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF124 family protein.
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Os03g0747300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF124 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.28 | 0.212 | 11.2 | -0.333 | 0.159 | 0.518 | 0.0795 | -0.246 | 0.0599 | 8.92 | 19.1 | 2341 | -- | -- |
| 20.18 | 0.209 | 11.2 | -0.339 | 0.151 | 0.64 | 0.16 | -- | 0.0614 | 9.25 | 18.4 | 2403 | -- | -- |
| 20.26 | 0.21 | 11.2 | -0.332 | 0.157 | 0.525 | -- | -0.228 | 0.061 | 8.76 | 19 | 2433 | -- | -- |
| 20.14 | 0.209 | 11.2 | -0.312 | 0.152 | 0.644 | -- | -- | 0.0704 | 8.95 | 18.4 | 2403 | -- | -- |
| 21.38 | 0.215 | 11.2 | -0.32 | -- | 0.566 | -- | -0.17 | 0.0719 | -- | 18.5 | 2638 | -- | -- |
| 26.13 | 0.24 | 11.2 | -0.0265 | 0.143 | -- | -0.00163 | -- | 0.183 | 7.85 | -- | -- | -- | -- |
| 26.13 | 0.239 | 11.2 | -0.0266 | 0.143 | -- | -- | -- | 0.183 | 7.86 | -- | -- | -- | -- |
| 21.28 | 0.215 | 11.2 | -0.323 | -- | 0.67 | -- | -- | 0.0682 | -- | 18.36 | 2676 | -- | -- |
| 22.15 | 0.219 | 11.2 | -- | 0.158 | 0.406 | -- | -- | 0.121 | 8.61 | 19.1 | 2404 | -- | -- |
| 27.24 | 0.244 | 11.2 | -0.0249 | -- | -- | -- | -- | 0.185 | -- | -- | -- | -- | -- |
| 26.15 | 0.239 | 11.2 | -- | 0.143 | -- | -- | -- | 0.186 | 7.87 | -- | -- | -- | -- |
| 23.06 | 0.224 | 11.2 | -- | -- | 0.55 | -- | -- | 0.133 | -- | 17.9 | 2552 | -- | -- |
| 27.25 | 0.244 | 11.2 | -- | -- | -- | -- | -- | 0.188 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.61 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 3 | 19.67 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 6 | 20.06 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 2 |
| 9 | 20.14 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 10 | 20.15 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 2 |
| 15 | 20.19 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 11 |
| 52 | 20.31 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 71 | 20.36 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 72 | 20.36 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 5 |
| 77 | 20.37 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 138 | 20.45 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 16 |
| 203 | 20.54 | humidity | 80 | 14400 | > th | dose dependent | rect. | 2 | 5 |
| 232 | 20.60 | temperature | 20 | 1440 | < th | dose dependent | rect. | 1 | 3 |
| 239 | 20.61 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 19 |
| 251 | 20.62 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 19 |
| 351 | 20.73 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 13 |
| 355 | 20.73 | humidity | 50 | 14400 | > th | dose dependent | rect. | 24 | 7 |
| 453 | 20.84 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 506 | 20.89 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 3 |
| 529 | 20.90 | humidity | 70 | 14400 | > th | dose dependent | rect. | 23 | 4 |
| 570 | 20.95 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 613 | 20.99 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 623 | 21.00 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 647 | 21.02 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 679 | 21.05 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 691 | 21.06 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 703 | 21.07 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 706 | 21.07 | humidity | 60 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 726 | 21.09 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 727 | 21.09 | humidity | 80 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 810 | 21.17 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 832 | 21.18 | temperature | 20 | 1440 | < th | dose dependent | sin | 11 | NA |
| 877 | 21.22 | humidity | 50 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 896 | 21.23 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 941 | 21.26 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 3 |