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Os03g0744800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : emp24/gp25L/p24 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.2 (0.0142) R2 : 0.0667
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.17 (0.0298) R2dN8 : 0.0861 R2N8 : 0.0667
σ : 0.267
deviance : 32.61
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
14.24 0.177 12.2 -0.222 0.665 0.542 -0.32 -2.16 0.0152 6.8 22.68 544 -- --
15.46 0.185 12.2 0.177 0.574 0.444 0.147 -- 0.12 5.75 21.76 46 -- --
14.44 0.177 12.2 -0.166 0.664 0.527 -- -1.83 0.033 6.79 22.71 540 -- --
15.37 0.184 12.2 0.172 0.569 0.459 -- -- 0.113 5.74 19.8 26 -- --
27.01 0.242 12.2 -0.13 -- 0.341 -- -1.01 0.0569 -- 15.8 2853 -- --
18.52 0.202 12.2 0.267 0.48 -- 0.00889 -- 0.192 6.79 -- -- -- --
18.52 0.202 12.2 0.268 0.48 -- -- -- 0.192 6.79 -- -- -- --
28.04 0.247 12.2 0.108 -- 0.364 -- -- 0.129 -- 14.45 4285 -- --
16.03 0.186 12.2 -- 0.591 0.553 -- -- 0.084 5.67 17.9 27 -- --
30.57 0.258 12.2 0.278 -- -- -- -- 0.201 -- -- -- -- --
20.4 0.211 12.2 -- 0.483 -- -- -- 0.162 6.76 -- -- -- --
28.26 0.248 12.2 -- -- 0.419 -- -- 0.108 -- 14.4 4295 -- --
32.61 0.267 12.2 -- -- -- -- -- 0.17 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 13.69 temperature 20 10 > th dose dependent sin 16 NA
6 13.90 temperature 10 10 > th dose dependent sin 17 NA
23 14.17 temperature 20 10 > th dose dependent rect. 12 15
24 14.18 temperature 20 90 > th dose dependent rect. 12 14
32 14.27 temperature 30 10 < th dose dependent sin 17 NA
46 14.36 temperature 20 720 > th dose dependent rect. 10 6
53 14.39 temperature 20 720 > th dose dependent rect. 4 17
54 14.40 humidity 70 43200 > th dose independent rect. 19 2
71 14.46 humidity 70 43200 < th dose independent rect. 19 1
79 14.47 temperature 20 720 > th dose dependent sin 23 NA
84 14.47 temperature 20 720 > th dose dependent rect. 4 14
89 14.48 humidity 90 43200 > th dose dependent rect. 13 1
94 14.49 wind 5 43200 < th dose independent rect. 14 1
97 14.50 wind 5 43200 > th dose independent rect. 14 1
99 14.50 humidity 80 43200 < th dose dependent rect. 20 1
106 14.52 wind 1 43200 > th dose dependent rect. 13 2
109 14.53 wind 9 43200 < th dose dependent rect. 13 2
115 14.54 atmosphere 1005 43200 > th dose independent rect. 5 1
141 14.57 atmosphere 1005 43200 < th dose independent rect. 11 1
150 14.58 atmosphere 1005 43200 > th dose independent rect. 11 1
166 14.59 humidity 90 43200 > th dose independent rect. 13 1
167 14.59 atmosphere 1005 43200 < th dose independent rect. 3 1
169 14.59 atmosphere 1005 43200 < th dose independent rect. 3 3
175 14.59 temperature 20 720 > th dose dependent rect. 20 22
182 14.60 atmosphere 1005 43200 > th dose independent rect. 2 15
186 14.60 atmosphere 1015 43200 < th dose dependent rect. 9 1
205 14.61 atmosphere 1005 43200 < th dose independent rect. 9 5
207 14.61 radiation 1 43200 < th dose independent rect. 18 11
208 14.61 atmosphere 1005 43200 > th dose independent rect. 2 12
209 14.61 atmosphere 1005 43200 > th dose independent rect. 4 12
211 14.61 atmosphere 1005 43200 < th dose independent rect. 2 12
238 14.61 temperature 20 90 > th dose dependent rect. 11 23
239 14.62 atmosphere 1005 43200 > th dose independent sin 2 NA
242 14.62 atmosphere 1005 43200 < th dose independent sin 2 NA
244 14.62 radiation 1 43200 < th dose independent rect. 18 1
264 14.62 atmosphere 1005 43200 > th dose independent rect. 4 10
314 14.62 humidity 60 43200 < th dose dependent rect. 18 13
334 14.63 atmosphere 1005 43200 > th dose independent rect. 8 8
337 14.63 atmosphere 1005 43200 < th dose independent rect. 7 9
384 14.63 humidity 50 43200 < th dose dependent rect. 17 15
386 14.63 temperature 20 720 > th dose dependent rect. 22 20
536 14.65 temperature 20 90 > th dose dependent rect. 5 22
640 14.66 temperature 20 720 > th dose dependent rect. 6 10
695 14.67 atmosphere 995 43200 > th dose dependent rect. 9 1
756 14.68 atmosphere 1005 43200 > th dose independent no NA NA
759 14.68 atmosphere 1005 43200 < th dose independent no NA NA
789 14.68 atmosphere 1005 43200 > th dose independent rect. 15 21
801 14.68 atmosphere 1005 43200 > th dose independent rect. 8 23
809 14.68 atmosphere 1005 43200 < th dose independent rect. 7 23
812 14.68 atmosphere 1005 43200 < th dose independent rect. 13 23
815 14.68 atmosphere 1005 43200 < th dose independent rect. 18 23
818 14.68 atmosphere 1010 43200 < th dose dependent sin 2 NA
822 14.68 atmosphere 995 43200 > th dose dependent rect. 7 1
826 14.68 atmosphere 1010 43200 < th dose dependent rect. 13 1
878 14.68 temperature 20 720 > th dose dependent rect. 17 23
921 14.69 atmosphere 1005 43200 > th dose independent rect. 9 21
926 14.69 atmosphere 1005 43200 < th dose independent rect. 8 21
929 14.69 atmosphere 1005 43200 < th dose independent rect. 14 21