Os03g0744700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0744700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 145.92 | 0.568 | 11.9 | -0.411 | 4.11 | -1.92 | 1.11 | 0.657 | -0.418 | 9.48 | 43.21 | 1021 | -- | -- |
| 146.36 | 0.563 | 11.9 | -0.364 | 4.1 | -1.88 | 1.27 | -- | -0.416 | 9.48 | 43.74 | 1028 | -- | -- |
| 149.47 | 0.569 | 11.9 | -0.459 | 4.11 | -1.93 | -- | 1.56 | -0.437 | 9.47 | 44.83 | 1019 | -- | -- |
| 152.21 | 0.575 | 11.9 | -0.315 | 4.06 | -1.81 | -- | -- | -0.425 | 9.44 | 47.34 | 1033 | -- | -- |
| 869.99 | 1.38 | 12.1 | -0.196 | -- | -1.15 | -- | 0.151 | -0.425 | -- | 67.64 | 1480 | -- | -- |
| 196.06 | 0.656 | 11.9 | -0.253 | 3.6 | -- | 1.01 | -- | -0.359 | 9.23 | -- | -- | -- | -- |
| 199.68 | 0.662 | 11.9 | -0.217 | 3.59 | -- | -- | -- | -0.359 | 9.22 | -- | -- | -- | -- |
| 870.08 | 1.38 | 12.1 | -0.19 | -- | -1.14 | -- | -- | -0.423 | -- | 67.64 | 1480 | -- | -- |
| 154.37 | 0.579 | 11.9 | -- | 4.13 | -1.74 | -- | -- | -0.377 | 9.43 | 51.99 | 993 | -- | -- |
| 949.47 | 1.44 | 12 | -0.231 | -- | -- | -- | -- | -0.342 | -- | -- | -- | -- | -- |
| 200.92 | 0.663 | 11.9 | -- | 3.59 | -- | -- | -- | -0.334 | 9.23 | -- | -- | -- | -- |
| 871.03 | 1.38 | 12.1 | -- | -- | -1.15 | -- | -- | -0.402 | -- | 67.64 | 1480 | -- | -- |
| 950.87 | 1.44 | 12 | -- | -- | -- | -- | -- | -0.316 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 141.18 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 9 |
| 2 | 141.77 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 7 | 143.24 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 8 | 143.32 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 16 |
| 30 | 143.67 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 14 |
| 48 | 143.94 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 8 |
| 51 | 143.99 | humidity | 50 | 720 | > th | dose dependent | sin | 15 | NA |
| 64 | 144.25 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 67 | 144.27 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 84 | 144.35 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 11 |
| 89 | 144.39 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 16 |
| 92 | 144.42 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 97 | 144.45 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 108 | 144.47 | radiation | 1 | 1440 | < th | dose dependent | sin | 21 | NA |
| 136 | 144.62 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 146 | 144.70 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 10 |
| 197 | 144.89 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 222 | 145.66 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 224 | 145.68 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 5 |
| 225 | 145.68 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 5 |
| 229 | 145.80 | humidity | 80 | 1440 | < th | dose independent | sin | 0 | NA |
| 230 | 145.81 | radiation | 1 | 1440 | > th | dose independent | sin | 20 | NA |
| 232 | 145.83 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 235 | 145.85 | radiation | 1 | 1440 | < th | dose independent | sin | 20 | NA |
| 270 | 146.31 | humidity | 50 | 720 | > th | dose dependent | rect. | 14 | 16 |
| 359 | 147.00 | humidity | 90 | 720 | < th | dose dependent | rect. | 15 | 9 |
| 369 | 147.10 | humidity | 80 | 1440 | > th | dose independent | sin | 0 | NA |
| 383 | 147.22 | humidity | 90 | 720 | < th | dose dependent | sin | 16 | NA |
| 392 | 147.32 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 421 | 147.68 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 422 | 147.68 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 429 | 147.72 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 455 | 147.95 | humidity | 80 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 467 | 148.04 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 598 | 149.07 | humidity | 50 | 720 | > th | dose dependent | rect. | 11 | 19 |
| 737 | 149.96 | humidity | 50 | 720 | > th | dose dependent | rect. | 11 | 21 |
| 783 | 150.28 | humidity | 90 | 720 | > th | dose dependent | rect. | 9 | 16 |
| 921 | 151.04 | humidity | 50 | 720 | > th | dose dependent | rect. | 7 | 23 |
| 939 | 151.14 | humidity | 50 | 720 | > th | dose dependent | rect. | 7 | 20 |
| 964 | 151.26 | humidity | 80 | 720 | > th | dose independent | rect. | 15 | 6 |
| 968 | 151.29 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 1 |