Os03g0744600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ripening-associated protein (Fragment).
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Os03g0744600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ripening-associated protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.66 | 0.192 | 14.2 | -0.28 | 0.382 | -0.589 | -0.251 | 0.94 | -0.123 | 17.3 | 25.44 | 1203 | -- | -- |
| 16.97 | 0.192 | 14.3 | -0.483 | 0.384 | -0.477 | -0.28 | -- | -0.195 | 17.1 | 25.85 | 1216 | -- | -- |
| 16.8 | 0.191 | 14.2 | -0.287 | 0.386 | -0.594 | -- | 0.937 | -0.126 | 17.5 | 25.43 | 1176 | -- | -- |
| 17.08 | 0.193 | 14.3 | -0.51 | 0.385 | -0.505 | -- | -- | -0.179 | 17.4 | 25.4 | 1165 | -- | -- |
| 24 | 0.228 | 14.2 | -0.276 | -- | -0.636 | -- | 0.836 | -0.0955 | -- | 24.41 | 1257 | -- | -- |
| 25.67 | 0.238 | 14.3 | -0.66 | 0.427 | -- | -0.183 | -- | -0.223 | 16.6 | -- | -- | -- | -- |
| 25.76 | 0.238 | 14.3 | -0.661 | 0.426 | -- | -- | -- | -0.224 | 16.6 | -- | -- | -- | -- |
| 24.37 | 0.23 | 14.3 | -0.459 | -- | -0.537 | -- | -- | -0.149 | -- | 24.79 | 1253 | -- | -- |
| 23.37 | 0.225 | 14.2 | -- | 0.361 | -0.61 | -- | -- | -0.0577 | 17.4 | 23.7 | 1221 | -- | -- |
| 35.42 | 0.278 | 14.3 | -0.677 | -- | -- | -- | -- | -0.235 | -- | -- | -- | -- | -- |
| 37.27 | 0.286 | 14.3 | -- | 0.438 | -- | -- | -- | -0.15 | 16.5 | -- | -- | -- | -- |
| 30.21 | 0.256 | 14.2 | -- | -- | -0.666 | -- | -- | -0.0677 | -- | 23.8 | 1261 | -- | -- |
| 47.52 | 0.322 | 14.2 | -- | -- | -- | -- | -- | -0.16 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.96 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 2 | 17.01 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 17 | 17.10 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 11 |
| 25 | 17.12 | temperature | 25 | 1440 | > th | dose dependent | sin | 18 | NA |
| 59 | 17.18 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 16 |
| 79 | 17.19 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 110 | 17.21 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 17 |
| 115 | 17.21 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 19 |
| 182 | 17.25 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 209 | 17.26 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 210 | 17.26 | temperature | 25 | 1440 | > th | dose dependent | rect. | 19 | 23 |
| 211 | 17.26 | temperature | 25 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 326 | 17.53 | temperature | 25 | 1440 | > th | dose dependent | rect. | 19 | 1 |
| 586 | 17.97 | temperature | 25 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 676 | 18.00 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 5 |
| 721 | 18.02 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 6 |
| 872 | 18.05 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 13 |
| 883 | 18.06 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 888 | 18.06 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 8 |