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Os03g0742800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Auxin-responsive protein IAA14 (Indoleacetic acid-induced protein 14) (SOLITARY-ROOT protein).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.3 (0.0159) R2 : 0.585
β1 : 1.47 (0.0583) R2dD : 0.598 R2D : 0.581
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0598 (0.034) R2dN8 : 0.00378 R2N8 : -0.013
σ : 0.299
deviance : 40.92
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
24.18 0.231 8.31 1.48 0.149 -0.396 0.335 0.356 0.0661 16.2 24.6 8 -- --
24.64 0.231 8.31 1.44 0.14 -0.413 0.208 -- 0.0691 16.9 24.52 7 -- --
24.41 0.23 8.31 1.48 0.142 -0.427 -- 0.249 0.0688 17.4 23.46 7 -- --
24.71 0.232 8.31 1.47 0.143 -0.422 -- -- 0.0663 17.4 23.38 7 -- --
25.44 0.235 8.3 1.47 -- -0.451 -- 0.246 0.064 -- 24.66 7 -- --
27.97 0.248 8.3 1.49 0.457 -- -0.0186 -- 0.0692 13.2 -- -- -- --
27.97 0.248 8.3 1.48 0.457 -- -- -- 0.0691 13.2 -- -- -- --
25.74 0.236 8.3 1.46 -- -0.447 -- -- 0.063 -- 24.56 7 -- --
81.55 0.421 8.34 -- 0.114 -0.462 -- -- -0.0994 17.1 30.73 6 -- --
40.92 0.299 8.3 1.47 -- -- -- -- 0.0598 -- -- -- -- --
86.05 0.434 8.33 -- 0.433 -- -- -- -0.0963 13.1 -- -- -- --
82.12 0.422 8.34 -- -- -0.466 -- -- -0.0989 -- 27.04 6 -- --
97.68 0.461 8.34 -- -- -- -- -- -0.103 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.33 wind 1.0 14400 < th dose independent rect. 2 2
3 23.69 wind 1.0 14400 > th dose independent rect. 2 2
4 23.70 radiation 1.0 4320 < th dose independent rect. 18 8
6 23.70 radiation 1.0 4320 < th dose dependent rect. 18 11
8 23.72 radiation 1.0 4320 < th dose independent rect. 18 1
11 23.73 radiation 1.0 4320 < th dose dependent rect. 21 8
13 23.74 radiation 1.0 4320 < th dose independent rect. 18 4
15 23.74 radiation 10.0 14400 < th dose dependent rect. 11 1
26 23.90 radiation 1.0 4320 > th dose independent rect. 18 1
36 23.92 humidity 90.0 14400 < th dose independent rect. 23 7
37 23.92 radiation 1.0 4320 < th dose dependent rect. 4 1
38 23.95 radiation 10.0 14400 < th dose independent rect. 11 1
40 23.95 radiation 1.0 4320 < th dose dependent rect. 18 8
42 23.96 radiation 1.0 4320 < th dose dependent rect. 18 1
50 23.98 temperature 20.0 14400 > th dose independent rect. 9 11
60 24.04 humidity 90.0 14400 < th dose independent rect. 24 1
62 24.04 radiation 20.0 10 < th dose dependent rect. 17 23
63 24.05 wind 1.0 14400 < th dose independent rect. 19 2
64 24.05 humidity 90.0 14400 > th dose independent rect. 23 7
66 24.06 radiation 10.0 90 < th dose independent rect. 12 23
69 24.08 temperature 20.0 14400 < th dose independent rect. 9 11
70 24.08 wind 1.0 43200 < th dose dependent rect. 2 2
72 24.09 wind 1.0 14400 > th dose independent rect. 19 1
82 24.12 wind 9.0 4320 < th dose independent rect. 20 17
83 24.12 wind 9.0 4320 > th dose independent rect. 19 18
96 24.15 wind 9.0 4320 > th dose dependent rect. 19 18
102 24.16 radiation 30.0 90 < th dose dependent rect. 12 23
113 24.21 humidity 90.0 14400 > th dose independent rect. 24 1
119 24.22 wind 9.0 14400 > th dose dependent rect. 4 1
122 24.23 radiation 20.0 10 < th dose dependent rect. 13 22
136 24.27 temperature 20.0 14400 > th dose independent rect. 15 4
149 24.29 radiation 10.0 10 < th dose independent rect. 17 23
150 24.29 temperature 20.0 14400 < th dose dependent rect. 16 6
180 24.34 temperature 20.0 14400 < th dose independent rect. 16 3
186 24.34 radiation 20.0 10 < th dose dependent no NA NA
198 24.36 radiation 10.0 270 < th dose independent rect. 22 22
202 24.37 radiation 20.0 270 < th dose independent rect. 23 20
203 24.37 temperature 20.0 14400 < th dose dependent rect. 20 1
206 24.37 radiation 20.0 10 < th dose dependent rect. 15 23
237 24.41 radiation 30.0 270 < th dose dependent rect. 22 22
238 24.41 radiation 20.0 10 < th dose dependent rect. 1 23
239 24.41 radiation 20.0 10 < th dose dependent rect. 6 23
244 24.42 humidity 90.0 14400 > th dose dependent rect. 1 1
257 24.44 temperature 20.0 14400 < th dose independent rect. 8 2
264 24.44 radiation 20.0 270 < th dose independent rect. 11 8
279 24.45 temperature 20.0 14400 > th dose independent rect. 8 2
293 24.45 temperature 20.0 14400 < th dose dependent rect. 8 14
301 24.46 radiation 10.0 30 < th dose independent rect. 7 13
309 24.47 radiation 10.0 270 < th dose independent rect. 6 12
333 24.48 radiation 10.0 10 < th dose dependent sin 23 NA
334 24.48 temperature 20.0 14400 < th dose dependent rect. 8 1
335 24.48 temperature 25.0 14400 < th dose dependent rect. 11 2
337 24.48 radiation 20.0 10 < th dose dependent rect. 9 23
338 24.49 precipitation 0.1 14400 > th dose independent rect. 22 1
340 24.49 temperature 20.0 14400 > th dose independent rect. 8 6
344 24.49 precipitation 0.1 14400 > th dose dependent rect. 22 1
354 24.50 precipitation 0.1 14400 < th dose independent rect. 21 2
366 24.50 precipitation 0.1 14400 < th dose dependent rect. 21 2
383 24.51 radiation 10.0 90 < th dose independent rect. 6 23
386 24.51 precipitation 0.1 14400 > th dose dependent rect. 20 2
389 24.52 temperature 20.0 14400 > th dose independent sin 21 NA
437 24.54 wind 1.0 43200 < th dose dependent rect. 2 4
444 24.55 radiation 10.0 14400 < th dose independent rect. 13 1
461 24.56 temperature 20.0 14400 < th dose independent sin 21 NA
462 24.56 temperature 15.0 14400 > th dose independent rect. 4 1
463 24.56 temperature 20.0 14400 > th dose independent rect. 12 1
466 24.56 wind 5.0 4320 > th dose dependent rect. 8 1
468 24.56 wind 1.0 14400 < th dose dependent rect. 19 2
490 24.57 temperature 20.0 14400 < th dose dependent rect. 17 1
494 24.57 precipitation 0.1 14400 > th dose dependent rect. 16 7
499 24.58 precipitation 0.1 14400 > th dose independent rect. 16 3
511 24.59 radiation 10.0 90 < th dose independent no NA NA
512 24.59 temperature 20.0 14400 < th dose independent rect. 12 1
513 24.59 radiation 10.0 1440 < th dose independent rect. 8 1
535 24.60 wind 5.0 14400 > th dose independent rect. 21 12
540 24.60 precipitation 0.1 14400 > th dose dependent rect. 16 1
542 24.60 humidity 90.0 14400 > th dose dependent rect. 24 4
544 24.60 humidity 90.0 14400 > th dose dependent rect. 24 6
565 24.61 wind 9.0 4320 > th dose dependent rect. 11 1
579 24.62 precipitation 0.1 14400 < th dose independent rect. 16 2
592 24.62 precipitation 0.1 14400 < th dose dependent rect. 16 2
609 24.63 precipitation 0.1 14400 > th dose independent rect. 16 6
628 24.64 wind 9.0 4320 < th dose independent rect. 11 1
635 24.64 wind 5.0 14400 < th dose independent rect. 21 12
656 24.65 wind 7.0 4320 > th dose independent rect. 7 3
667 24.65 radiation 10.0 90 < th dose independent rect. 15 23
676 24.65 wind 9.0 4320 > th dose dependent rect. 5 7
687 24.66 precipitation 0.1 14400 < th dose independent rect. 16 6
692 24.66 humidity 90.0 14400 > th dose dependent rect. 3 3
696 24.66 precipitation 0.1 14400 < th dose dependent rect. 16 6
703 24.67 radiation 10.0 90 < th dose independent sin 23 NA
704 24.67 temperature 15.0 14400 < th dose independent rect. 4 1
712 24.68 precipitation 0.1 43200 > th dose independent rect. 14 1
721 24.68 precipitation 0.1 43200 > th dose dependent rect. 14 1
722 24.68 wind 9.0 4320 > th dose dependent rect. 4 9
732 24.69 wind 1.0 43200 < th dose independent rect. 22 10
737 24.69 precipitation 0.1 14400 > th dose dependent rect. 16 3
745 24.69 wind 9.0 4320 > th dose dependent rect. 1 12
771 24.71 humidity 90.0 14400 > th dose independent rect. 5 1
779 24.71 wind 1.0 43200 < th dose independent rect. 17 15
788 24.71 precipitation 0.1 14400 > th dose dependent rect. 11 12
854 24.74 wind 7.0 4320 < th dose independent rect. 7 3
858 24.74 wind 5.0 14400 < th dose independent rect. 21 9
868 24.74 radiation 10.0 10 < th dose independent rect. 6 23
872 24.74 wind 5.0 14400 > th dose dependent rect. 21 12
878 24.75 precipitation 0.1 43200 < th dose independent rect. 14 1
893 24.75 precipitation 0.1 43200 < th dose dependent rect. 14 1
906 24.76 precipitation 0.1 14400 > th dose independent rect. 8 4
910 24.76 wind 9.0 4320 > th dose independent rect. 1 12
918 24.76 precipitation 0.1 14400 > th dose dependent rect. 8 4
924 24.76 radiation 10.0 10 < th dose dependent rect. 6 14
930 24.77 wind 9.0 4320 > th dose independent rect. 4 9
955 24.78 wind 9.0 4320 < th dose independent rect. 4 9
973 24.78 wind 1.0 43200 < th dose dependent rect. 2 6
976 24.78 precipitation 0.1 43200 > th dose dependent rect. 8 11
982 24.78 radiation 20.0 10 < th dose dependent rect. 1 21