Os03g0742300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : CheY-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0742300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : CheY-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.17 | 0.329 | 2.81 | 0.0283 | 0.0817 | -0.194 | -0.274 | 3.53 | 0.0715 | 2.58 | 0.1368 | 9 | -- | -- |
| 52.2 | 0.336 | 2.82 | 0.00145 | 0.0709 | 0.573 | -0.152 | -- | 0.0745 | 2.7 | 9.833e-05 | 8 | -- | -- |
| 49.42 | 0.327 | 2.81 | 0.0364 | 0.0826 | -0.196 | -- | 3.39 | 0.073 | 2.8 | 0.1198 | 8 | -- | -- |
| 52.24 | 0.337 | 2.82 | 0.00648 | 0.0458 | 0.4 | -- | -- | 0.0633 | 3.1 | 1.234 | 16 | -- | -- |
| 49.8 | 0.329 | 2.81 | 0.0373 | -- | -0.129 | -- | 3.33 | 0.0767 | -- | 0.1065 | 8 | -- | -- |
| 53.93 | 0.344 | 2.82 | 0.0407 | 0.106 | -- | -0.019 | -- | 0.0698 | 2.23 | -- | -- | -- | -- |
| 53.93 | 0.344 | 2.82 | 0.0413 | 0.106 | -- | -- | -- | 0.07 | 2.2 | -- | -- | -- | -- |
| 52.3 | 0.337 | 2.82 | 0.00972 | -- | 0.458 | -- | -- | 0.0793 | -- | 1.257 | 16 | -- | -- |
| 52.15 | 0.336 | 2.81 | -- | 0.0465 | 0.438 | -- | -- | 0.087 | 1.07 | 1.195 | 16 | -- | -- |
| 54.6 | 0.345 | 2.82 | 0.0457 | -- | -- | -- | -- | 0.0725 | -- | -- | -- | -- | -- |
| 53.98 | 0.344 | 2.82 | -- | 0.106 | -- | -- | -- | 0.0654 | 2.21 | -- | -- | -- | -- |
| 52.3 | 0.337 | 2.82 | -- | -- | 0.457 | -- | -- | 0.0786 | -- | 1.266 | 16 | -- | -- |
| 54.65 | 0.345 | 2.82 | -- | -- | -- | -- | -- | 0.0674 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.66 | wind | 1.0 | 30 | < th | dose dependent | rect. | 23 | 4 |
| 3 | 47.73 | wind | 1.0 | 10 | < th | dose independent | rect. | 23 | 1 |
| 7 | 47.73 | wind | 1.0 | 10 | < th | dose dependent | rect. | 23 | 1 |
| 13 | 47.93 | wind | 1.0 | 10 | < th | dose independent | rect. | 22 | 6 |
| 152 | 48.77 | wind | 1.0 | 90 | < th | dose independent | rect. | 22 | 2 |
| 153 | 48.78 | wind | 1.0 | 10 | < th | dose dependent | rect. | 12 | 16 |
| 170 | 48.84 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 172 | 48.85 | temperature | 25.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 175 | 48.86 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 176 | 48.86 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 179 | 48.86 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 183 | 48.86 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 193 | 48.86 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 194 | 48.86 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 216 | 48.86 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 219 | 48.86 | wind | 1.0 | 10 | < th | dose dependent | sin | 16 | NA |
| 221 | 48.86 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 227 | 48.87 | humidity | 80.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 228 | 48.87 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 245 | 48.89 | humidity | 90.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 247 | 48.89 | wind | 5.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 254 | 48.91 | wind | 1.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 258 | 48.91 | temperature | 10.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 260 | 48.91 | temperature | 30.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 261 | 48.91 | humidity | 50.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 264 | 48.91 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 265 | 48.91 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 267 | 48.91 | radiation | 1.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 273 | 48.91 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 274 | 48.91 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 282 | 48.93 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 1 |
| 283 | 48.93 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 285 | 48.93 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 311 | 49.05 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 327 | 49.13 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 343 | 49.18 | wind | 1.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 351 | 49.23 | wind | 1.0 | 90 | < th | dose independent | rect. | 16 | 8 |
| 380 | 49.31 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 385 | 49.34 | wind | 1.0 | 10 | < th | dose independent | rect. | 12 | 16 |
| 395 | 49.38 | wind | 1.0 | 10 | < th | dose independent | rect. | 9 | 19 |
| 421 | 49.43 | wind | 1.0 | 10 | < th | dose independent | rect. | 6 | 22 |
| 539 | 49.80 | wind | 1.0 | 10 | < th | dose independent | sin | 15 | NA |
| 554 | 49.90 | wind | 9.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 567 | 49.97 | wind | 1.0 | 10 | > th | dose independent | sin | 15 | NA |
| 679 | 50.23 | wind | 1.0 | 10 | < th | dose dependent | rect. | 23 | 14 |
| 835 | 50.41 | wind | 1.0 | 10 | < th | dose dependent | no | NA | NA |