Os03g0739700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Uncharacterized protein UPF0114 family protein.
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Os03g0739700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Uncharacterized protein UPF0114 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 535.69 | 1.09 | 10.7 | -2.3 | 6 | -6 | 1.5 | 0.0232 | -0.468 | 7.97 | 9.459 | 734 | 21 | 13.2 |
| 535.28 | 1.08 | 10.7 | -2.3 | 5.95 | -5.99 | 1.46 | -- | -0.482 | 8.01 | 8.961 | 742 | 21 | 13.3 |
| 537.15 | 1.08 | 10.6 | -2.06 | 6.05 | -5.95 | -- | 1.94 | -0.413 | 7.97 | 8.428 | 739 | 20.8 | 13.6 |
| 541.67 | 1.08 | 10.6 | -2.26 | 6.04 | -5.97 | -- | -- | -0.439 | 8.04 | 7.77 | 738 | 20.8 | 13.7 |
| 644.76 | 1.18 | 10.8 | -1.76 | -- | -4.66 | -- | -1.06 | -0.323 | -- | -0.7146 | 819 | 0.758 | 18.3 |
| 720.13 | 1.26 | 10.9 | -3.1 | 3.17 | -- | 0.954 | -- | -1.1 | 5.96 | -- | -- | -- | -- |
| 722.35 | 1.26 | 10.9 | -3.09 | 3.17 | -- | -- | -- | -1.1 | 5.94 | -- | -- | -- | -- |
| 592.38 | 1.13 | 10.8 | -2.16 | -- | -4.81 | -- | -- | -0.658 | -- | 11.38 | 746 | 3.17 | 14.8 |
| 668.31 | 1.2 | 10.6 | -- | 6.16 | -6.45 | -- | -- | -0.123 | 8.11 | 9.09 | 738 | 20.5 | 14.3 |
| 1243.98 | 1.65 | 11 | -3 | -- | -- | -- | -- | -1.03 | -- | -- | -- | -- | -- |
| 974.11 | 1.46 | 10.8 | -- | 3.13 | -- | -- | -- | -0.758 | 5.99 | -- | -- | -- | -- |
| 709.81 | 1.24 | 10.8 | -- | -- | -5.59 | -- | -- | -0.363 | -- | 16.39 | 710 | 2.12 | 16 |
| 1480.79 | 1.8 | 10.9 | -- | -- | -- | -- | -- | -0.697 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 537.58 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 13 |
| 4 | 543.00 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 11 |
| 25 | 553.79 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 15 |
| 26 | 554.32 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 31 | 555.85 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 17 |
| 32 | 555.90 | temperature | 10 | 720 | > th | dose dependent | sin | 7 | NA |
| 38 | 556.33 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 11 |
| 42 | 556.58 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 21 |
| 48 | 557.06 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 75 | 558.75 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 8 |
| 114 | 561.22 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 22 |
| 143 | 562.50 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 21 |
| 410 | 572.60 | temperature | 10 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 531 | 574.91 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 8 |
| 570 | 575.38 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 682 | 576.96 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |