Os03g0734500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0734500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 226.99 | 0.708 | 3.73 | -1.12 | 0.175 | 0.806 | -0.424 | -2.58 | -0.495 | 5.39 | 26.7 | 4324 | -- | -- |
| 227.4 | 0.702 | 3.7 | -0.696 | 0.169 | 0.724 | -0.45 | -- | -0.579 | 5 | 22.8 | 10270 | -- | -- |
| 227.41 | 0.702 | 3.73 | -1.12 | 0.177 | 0.803 | -- | -2.59 | -0.497 | 5.82 | 26.7 | 4324 | -- | -- |
| 227.88 | 0.703 | 3.7 | -0.685 | 0.175 | 0.72 | -- | -- | -0.58 | 5.48 | 22.76 | 10332 | -- | -- |
| 228.97 | 0.705 | 3.73 | -1.11 | -- | 0.815 | -- | -2.56 | -0.489 | -- | 26.72 | 4324 | -- | -- |
| 241.3 | 0.728 | 3.63 | -0.223 | 0.194 | -- | -0.421 | -- | -0.264 | 4.95 | -- | -- | -- | -- |
| 241.75 | 0.728 | 3.63 | -0.222 | 0.192 | -- | -- | -- | -0.262 | 5.14 | -- | -- | -- | -- |
| 229.3 | 0.705 | 3.7 | -0.646 | -- | 0.708 | -- | -- | -0.582 | -- | 23.1 | 10097 | -- | -- |
| 234.65 | 0.713 | 3.65 | -- | 0.183 | 0.474 | -- | -- | -0.358 | 5.8 | 28 | 8969 | -- | -- |
| 243.67 | 0.729 | 3.63 | -0.215 | -- | -- | -- | -- | -0.257 | -- | -- | -- | -- | -- |
| 243.05 | 0.729 | 3.62 | -- | 0.188 | -- | -- | -- | -0.237 | 5.18 | -- | -- | -- | -- |
| 235.65 | 0.715 | 3.66 | -- | -- | 0.426 | -- | -- | -0.387 | -- | 27.8 | 8553 | -- | -- |
| 244.9 | 0.73 | 3.62 | -- | -- | -- | -- | -- | -0.233 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 217.16 | wind | 7.0 | 30 | > th | dose dependent | rect. | 21 | 7 |
| 11 | 217.33 | wind | 7.0 | 10 | > th | dose independent | rect. | 21 | 7 |
| 19 | 217.71 | wind | 9.0 | 30 | > th | dose independent | rect. | 21 | 14 |
| 23 | 217.76 | wind | 7.0 | 30 | > th | dose independent | rect. | 21 | 5 |
| 24 | 217.76 | wind | 7.0 | 30 | > th | dose dependent | rect. | 21 | 5 |
| 90 | 218.18 | wind | 9.0 | 30 | > th | dose dependent | rect. | 18 | 8 |
| 117 | 219.30 | wind | 9.0 | 90 | > th | dose dependent | rect. | 18 | 4 |
| 133 | 219.57 | wind | 7.0 | 30 | > th | dose independent | rect. | 21 | 1 |
| 137 | 219.57 | wind | 7.0 | 30 | > th | dose dependent | rect. | 21 | 1 |
| 285 | 219.99 | wind | 9.0 | 30 | > th | dose independent | rect. | 18 | 8 |
| 314 | 220.33 | wind | 9.0 | 90 | > th | dose independent | rect. | 18 | 4 |
| 446 | 222.66 | wind | 9.0 | 30 | < th | dose independent | sin | 10 | NA |
| 470 | 223.37 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 471 | 223.38 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 478 | 223.50 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 20 | 2 |
| 482 | 223.57 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 4 | 3 |
| 485 | 223.64 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 495 | 223.97 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 507 | 224.02 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 17 | 6 |
| 512 | 224.11 | wind | 9.0 | 30 | > th | dose independent | sin | 10 | NA |
| 513 | 224.12 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 16 | 7 |
| 531 | 224.37 | wind | 1.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 532 | 224.37 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 4 | 5 |
| 534 | 224.41 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 580 | 225.22 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 589 | 225.34 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 590 | 225.36 | wind | 1.0 | 4320 | > th | dose independent | rect. | 4 | 5 |
| 595 | 225.45 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 599 | 225.53 | wind | 1.0 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 600 | 225.53 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 603 | 225.58 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 612 | 225.69 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 621 | 225.73 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 8 | 3 |
| 629 | 225.82 | wind | 1.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 630 | 225.82 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 632 | 225.82 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 8 | 3 |
| 642 | 225.90 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 651 | 225.94 | wind | 1.0 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 657 | 226.01 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 658 | 226.01 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 19 | 10 |
| 659 | 226.01 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 12 | 20 |
| 665 | 226.09 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 668 | 226.13 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 673 | 226.16 | wind | 1.0 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 700 | 226.23 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 701 | 226.23 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 6 |
| 711 | 226.30 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 712 | 226.30 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 719 | 226.33 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 721 | 226.35 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 725 | 226.35 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 2 | 7 |
| 729 | 226.37 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 754 | 226.45 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 4 |
| 763 | 226.47 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 774 | 226.52 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 783 | 226.54 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 789 | 226.55 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 815 | 226.61 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 817 | 226.62 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 820 | 226.62 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 837 | 226.66 | wind | 1.0 | 1440 | > th | dose independent | rect. | 8 | 4 |
| 838 | 226.66 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 14 | 2 |
| 846 | 226.70 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 848 | 226.70 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 849 | 226.71 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 850 | 226.71 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 883 | 226.77 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 901 | 226.82 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 909 | 226.83 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 14 | NA |
| 921 | 226.85 | wind | 7.0 | 30 | > th | dose dependent | sin | 10 | NA |
| 942 | 226.90 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 14 | 5 |
| 946 | 226.91 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 964 | 226.91 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 995 | 226.95 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 1000 | 226.97 | wind | 3.0 | 43200 | > th | dose independent | rect. | 11 | 2 |