Os03g0734300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Proteinase inhibitor type II CEVI57 precursor.
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Os03g0734300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Proteinase inhibitor type II CEVI57 precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 282.86 | 0.79 | 8.78 | -4.41 | 1.3 | 1.04 | 0.63 | -3.44 | -0.0961 | 4.33 | 21.36 | 1753 | -- | -- |
| 308.42 | 0.818 | 8.66 | -3.56 | 1.33 | 1.32 | 0.682 | -- | 0.0781 | 4.27 | 21.2 | 1754 | -- | -- |
| 282.34 | 0.783 | 8.8 | -4.53 | 1.34 | 1.01 | -- | -3.64 | -0.135 | 4.33 | 21.6 | 1750 | -- | -- |
| 304.41 | 0.813 | 8.66 | -3.86 | 1.22 | 1.91 | -- | -- | 0.118 | 4.64 | 18.5 | 2358 | -- | -- |
| 369.99 | 0.896 | 8.79 | -4.47 | -- | 1.13 | -- | -3.49 | -0.166 | -- | 22.3 | 1462 | -- | -- |
| 356.2 | 0.885 | 8.58 | -2.96 | 1.3 | -- | 0.647 | -- | 0.471 | 4.27 | -- | -- | -- | -- |
| 357.32 | 0.885 | 8.58 | -2.96 | 1.31 | -- | -- | -- | 0.467 | 4.34 | -- | -- | -- | -- |
| 381.53 | 0.91 | 8.67 | -3.93 | -- | 2.28 | -- | -- | 0.108 | -- | 18.4 | 2628 | -- | -- |
| 588.03 | 1.14 | 8.51 | -- | 1.24 | -0.179 | -- | -- | 0.806 | 4.43 | 18.5 | 2358 | -- | -- |
| 449.48 | 0.991 | 8.59 | -2.91 | -- | -- | -- | -- | 0.502 | -- | -- | -- | -- | -- |
| 588.57 | 1.13 | 8.51 | -- | 1.25 | -- | -- | -- | 0.797 | 4.39 | -- | -- | -- | -- |
| 512.23 | 1.05 | 8.44 | -- | -- | -1.44 | -- | -- | 1.38 | -- | 34.9 | 47520 | -- | -- |
| 672.89 | 1.21 | 8.52 | -- | -- | -- | -- | -- | 0.825 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 274.08 | humidity | 80 | 14400 | > th | dose dependent | rect. | 21 | 7 |
| 2 | 274.18 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 3 | 274.39 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 8 | 274.68 | humidity | 80 | 14400 | > th | dose dependent | rect. | 22 | 5 |
| 41 | 276.12 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 7 |
| 52 | 276.29 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 127 | 277.51 | humidity | 90 | 14400 | > th | dose independent | rect. | 20 | 8 |
| 169 | 277.91 | humidity | 90 | 14400 | > th | dose dependent | rect. | 20 | 11 |
| 228 | 278.59 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 247 | 278.73 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 295 | 279.09 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 7 |
| 301 | 279.13 | humidity | 90 | 14400 | > th | dose dependent | sin | 10 | NA |
| 399 | 280.00 | temperature | 15 | 1440 | > th | dose dependent | sin | 10 | NA |
| 521 | 280.99 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 5 |
| 523 | 281.00 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 548 | 281.23 | humidity | 90 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 551 | 281.24 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 571 | 281.35 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 708 | 282.29 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 789 | 282.79 | humidity | 90 | 14400 | > th | dose independent | sin | 11 | NA |
| 828 | 283.01 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 856 | 283.23 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 918 | 283.70 | radiation | 30 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 933 | 283.78 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 934 | 283.80 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 950 | 283.88 | humidity | 50 | 14400 | > th | dose dependent | rect. | 1 | 1 |